Bradyrhizobium sp. C-145: LRP30_18125
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Entry
LRP30_18125 CDS
T09672
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
braz
Bradyrhizobium sp. C-145
Pathway
braz00190
Oxidative phosphorylation
braz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
braz00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LRP30_18125
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LRP30_18125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
braz03019
]
LRP30_18125
Enzymes [BR:
braz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LRP30_18125
Messenger RNA biogenesis [BR:
braz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LRP30_18125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
UQR67051
LinkDB
All DBs
Position
complement(3918853..3921045)
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AA seq
730 aa
AA seq
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MDSAQALEIKEKAPETEGLPAIASSPERFINRELSWLHFNRRVLEESVNPSHPMLERVRF
LSISANNLDEFFMVRVAGIKAQVREGIAERAPDGLTPSEQLALINRTVSELASDQQAIWR
DLRGTLADVGIVLVEGKDVTKAERTWIEDYFLNNVFPLLTPLAIDPAHPFPFIPSLGFTI
ALQLTRAADGKQMNALIRMPGKIDRFIRLPAEGKAVRLISLEQATALFINRLFPGYNLHG
QGAFRIIRDSELEIEEEAEDLVRLFETALKRRRRGSVIRLEIDAKMPEELRSFVQHALSA
ADDEVFLVDGVLAMNELSQLTRIDRPDLEFTPYVPRHPERVREHAGDIFAAIRQKDLIVH
HPYESFDVVVQFLQQAARDPDVVAIKQTLYRTSQNSPIVRALAEAAEAGKSVTALIELKA
RFDEEANIRWARDLERAGVQVVYGFLELKTHAKLSMVVRREGGSLTTYVHTGTGNYHSVT
ARIYTDLSYFTSDPTIGRDAARVFNFITGYAAPSDLEKMAVSPLTLRKRIIEHIQGETAH
ARHGRHGAVWMKMNALVDPDIIDALYEASQAGVQVELVVRGICCLRPGIPGLSENIRVKS
IIGRFLEHGRIYCFGMGQGLPSAKAAVYISSADMMPRNLDRRVEVLCPLQNPTVHQQVLE
QIMVANLKDNEQSWQLLPDGSSTRMKAAKGEEPFNVHNYFMTNPSLSGRGKSLKESSPRR
LTRRNERHQS
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggactcagcgcaagcccttgaaatcaaagaaaaagctccggaaaccgagggcctgccg
gcgatcgcttccagccccgagcgattcatcaaccgcgagctgtcctggctgcatttcaat
cgccgcgtcctggaggaatcggtcaatcccagccaccccatgctggagcgggtacgattc
ctgtcgatttcagcgaataacctcgacgagttcttcatggtccgcgtggccggcatcaag
gcccaggtgcgcgagggcattgccgagcgcgcccccgatggcctgacgccgtcggagcag
ctcgcgctgatcaaccgcaccgtctccgagcttgcctccgaccagcaggcgatctggcgc
gacctgcgcggcacgctcgccgatgtcggcatcgtgctggttgagggcaaggacgtcacc
aaggcggagcggacctggatcgaggactacttcctcaacaacgtgttcccgctgctgacg
ccgctcgcaatcgatccggcccaccctttcccgttcattccaagcctcggcttcaccatc
gcgctccagctcacgcgcgccgccgacggcaagcagatgaacgcgctgatccgcatgccc
ggcaagatcgatcgcttcatccgcctaccagccgagggcaaggccgtccggctgatttcg
ctggaacaggcgaccgccctgttcatcaaccgcctcttccccggatacaatttgcacggc
cagggcgccttccgaatcatccgcgactccgagctcgaaatcgaggaagaggcggaagac
ttggtccgcctgttcgagaccgcgctgaagcgtcgccgccgcggctccgtgatccggctc
gagatcgacgccaaaatgcccgaggaattgcggagcttcgtgcagcacgcattgtcggcc
gccgatgacgaggtgttcctggtcgacggcgtgctcgccatgaacgagctttcgcagctc
acccgcatcgaccgtcccgacctcgaattcaccccttacgtgccgcgccatcccgagcgg
gtgcgcgagcatgccggcgacatcttcgctgcgatccggcagaaggacctcattgtccat
cacccctacgaatccttcgacgtggtggtgcagttcctgcagcaggccgcgcgcgaccca
gatgttgtcgcgatcaagcagacgctctaccgcacctcgcagaactcaccgatcgtgcgt
gcactggccgaggccgccgaggccggcaagtcggtcaccgcgctgatcgagctgaaggcg
cgattcgacgaagaggccaacatccgctgggcacgcgacctcgaacgcgccggcgtgcaa
gtcgtctacggcttcctcgaactgaagacgcatgcaaagctctcgatggtggtgcgccgc
gagggcggcagcctcacgacctacgtccataccggcaccggcaactatcactcggtgacc
gcgcgcatctacaccgacctctcctacttcacctcggatccgaccatcggccgagacgcg
gcgcgcgtgttcaatttcatcactggctatgccgcgccgagcgatctggagaagatggcg
gtgtcgccattgaccttgcgcaagcgcatcatcgagcacatccagggcgagaccgcgcat
gcacggcacggccggcacggcgcggtctggatgaagatgaatgcgcttgtcgaccccgac
atcatcgacgcgctctacgaggcctcgcaagccggcgtccaggtcgagttggtggtgcgc
ggcatctgctgcctcaggcccggaattcccggcctgtcggagaacatccgcgtcaagtcg
atcatcggacgcttcctggaacacggccgaatctactgcttcggcatgggccagggcctg
ccgagtgcgaaagcggctgtgtatatctcctcggccgacatgatgccgcgcaacctcgac
cgccgcgtcgaggtgctgtgtccgctgcaaaatcccactgtgcatcagcaggttctcgaa
cagatcatggtcgcgaatctgaaggacaatgagcagagctggcaattgttgccggacggg
tcctcaacgcgtatgaaggccgcgaagggcgaggagcctttcaacgtccacaactacttc
atgacaaatccgagtctctctggccgtggaaagtcgctcaaagaatcctcgccgcgccgt
ctcacgcgccggaacgaacgtcaccaatcctga
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