Bradyrhizobium sp. C-145: LRP30_18190
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Entry
LRP30_18190 CDS
T09672
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
braz
Bradyrhizobium sp. C-145
Brite
KEGG Orthology (KO) [BR:
braz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
braz03016
]
LRP30_18190 (rnd)
Enzymes [BR:
braz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LRP30_18190 (rnd)
Transfer RNA biogenesis [BR:
braz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LRP30_18190 (rnd)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
UQR67063
UniProt:
A0AB38SP10
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All DBs
Position
complement(3931139..3932287)
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AA seq
382 aa
AA seq
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MDLITTTADLAAACSRLAKHPVITVDTEFLRETTYYPLLCVVQMASAEEAVVIDALAEDI
DLKPFFELMGNEGVLKVFHAARQDIEIIWHQAGIIPHPVFDTQVAAMVLGYGDSIAYDQL
VEKVTGHRPDKTHRFTDWSRRPLTKEQMHYAVSDVTHLRDVFAALDADLKKRRRSEWVSI
EMEVLTSPRTYDFHPERAWERLKTRVRKPKDLAVLMEVAAWREQEAQSRDVPRGRVLRDE
AISDIATHAPTTLEKLAHLRSVPKGFEKSKWGADIVAAVERGLARDFSTLPKLEKPRNNS
NGAAIVELLKVLLRMTAERHAVASKVIATVDHLEEIAASDEADVPALRGWRRELFGDAAL
KLKRGELALAIEKGRVVGVQRA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatttgattaccaccactgctgacctcgcggctgcctgcagccggctggccaagcac
cccgtcataaccgtcgataccgagtttctgcgcgaaaccacctattacccgctgttgtgc
gtggtgcagatggccagcgccgaggaagccgtcgtcatcgacgccctggccgaggacatc
gacctcaaaccgttcttcgagctgatgggcaacgaaggcgtgctgaaggtcttccacgcc
gcccgccaggacatcgagatcatctggcaccaggccggcatcatcccgcatccggtgttc
gacacccaggtcgcggccatggtgctcggctatggcgacagcatcgcctatgaccagttg
gtcgagaaggtcaccggtcaccgcccggacaagactcaccgcttcaccgactggtcgcgc
cggccgctcaccaaggagcagatgcactacgcggtatcagacgtcacccacctgcgcgac
gtgttcgccgcgcttgacgccgacctgaagaagcgccgccgcagcgaatgggtctccatc
gagatggaggttttgacctcgcctaggacctacgacttccaccccgagcgcgcctgggag
cggctgaagacccgggtgcgcaagccgaaggacctcgcggtactgatggaggtcgcggcc
tggcgcgagcaggaggcgcagagccgcgacgtgccgcgcggtcgcgtgctgcgcgatgaa
gcgatcagcgacatcgcaacgcatgcgccgaccacgctggagaagctcgcccatctgcgc
tcggtgccgaaggggtttgagaaatccaaatggggcgcggacatcgtcgccgcggtcgag
cgcgggctggcgcgggatttctcgacgctgccgaagctggagaagccgcgcaacaactct
aatggcgccgccatcgtcgagctgttgaaggtgctgctgcgcatgaccgcggagcgccat
gcagtcgccagcaaggtgatcgccaccgtcgaccatctcgaggagattgcagccagtgac
gaggccgacgtgccggccctgcgcggctggcgccgcgagctgttcggcgatgccgcgctg
aagctcaagcgcggcgagctggcgctcgcgatcgaaaagggccgcgtggtcggggtgcag
cgggcgtag
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