Bradyrhizobium sp. C-145: LRP30_20445
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Entry
LRP30_20445 CDS
T09672
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
braz
Bradyrhizobium sp. C-145
Brite
KEGG Orthology (KO) [BR:
braz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
braz03009
]
LRP30_20445 (rimO)
Enzymes [BR:
braz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LRP30_20445 (rimO)
Ribosome biogenesis [BR:
braz03009
]
Prokaryotic type
ribosomal protein modification factors
LRP30_20445 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NTPase_1
TRAM
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
UQR67477
UniProt:
A0AB38SQS2
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All DBs
Position
4387490..4388815
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AA seq
441 aa
AA seq
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MDQTAAPKVSFVSLGCPKALVDSERIITRLRAEGYELARKHDGADIVIVNTCGFLDSAKQ
ESLSAIGEAMAENGKVIVTGCMGAEPEQIEQAYPGVLSITGPQQYESVLDAVHRALPPAH
NPHLDLVPPQGIKLTPRHYAYLKISEGCNNRCTFCIIPKLRGDLVSRPANDVLREAERLV
GAGVKELLVISQDTSAYGVDLKYAESPWRDRQVRAKFLDLARELGELGAWIRLQYVYPYP
HVDEVIALMNDGKVLPYLDIPFQHASPEVLKAMKRPAAQDKTLARIKRWREECPDLALRS
TFIVGFPGETDADFAYLLDWLDEAEIDRVGCFKYEPVAGATSNAIENPVPEEVKQERYNA
LMARQQKISARRLKRKIGTRQQIIIDEVGPTVAKGRSKADAPEIDGAVYLSSRRPLRIGE
IVTAKIERADAYDLHGSVAGF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggatcagacggctgcgcccaaggtcagcttcgtatcgctcgggtgtcccaaggcattg
gtggattccgagcgcatcatcacgcgcctgcgcgccgagggctatgagctcgcccgcaag
catgatggggccgacatcgtcatcgtcaacacctgcggattcctcgacagtgccaagcag
gaatcgctctcggcgatcggcgaggccatggccgagaacggcaaggtgatcgtgacaggc
tgcatgggtgcggaacccgagcagatcgagcaggcctatcccggcgtgctctccatcact
ggcccgcagcaatatgagagcgtgctcgacgccgtgcaccgcgccctgccgccggcccac
aatccgcatctcgacctggtgccgccgcagggcatcaagctgacgccgcgccactacgct
tacttgaagatctccgagggctgcaacaaccgctgcaccttctgcatcatcccgaagctg
cgcggcgacctcgtctcgcgccccgccaacgacgtgctgcgcgaggccgagcgcttggtc
ggtgccggcgtcaaggaattgctggtgatctcgcaggacacctcggcctatggtgtcgat
ctcaaatacgccgagagcccgtggagggatcgccaggtccgcgccaaattcctcgatctc
gcgcgcgagctcggcgagctcggggcctggattcggctgcaatatgtctacccctacccc
catgtcgacgaagtcatcgcgctgatgaatgacggcaaggtgctgccctatctcgacatc
ccgttccagcatgcgagccccgaggtgctgaaggcgatgaagcgccccgcggcgcaggac
aagacgctggcgcgcatcaagcgctggcgcgaggaatgtccagatctcgccttgcgctcg
accttcatcgtcggctttcccggcgagaccgatgccgatttcgcctatctgctcgactgg
ctggatgaggccgagatcgaccgcgtcggctgcttcaaatacgagccggttgcgggcgcc
acgtcgaacgcgatcgagaatcccgtgcccgaagaggtcaagcaggagcgctacaacgcg
ctgatggcccgccagcaaaagatctctgcgcgcaggctgaagcgcaagatcggcacgcgc
cagcagatcatcatcgacgaggtcggcccgacggtggccaaaggccgctccaaggccgat
gcgccggagatcgacggcgcggtctatctctccagccgccgccccttgcgcatcggcgag
atcgtcacggccaagatcgagcgcgccgacgcatacgacctgcacggcagcgtcgcgggg
ttctga
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