Bradyrhizobium sp. C-145: LRP30_24245
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Entry
LRP30_24245 CDS
T09672
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
braz
Bradyrhizobium sp. C-145
Pathway
braz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
braz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LRP30_24245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
braz03021
]
LRP30_24245
03400 DNA repair and recombination proteins [BR:
braz03400
]
LRP30_24245
Enzymes [BR:
braz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LRP30_24245
Transcription machinery [BR:
braz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LRP30_24245
DNA repair and recombination proteins [BR:
braz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LRP30_24245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
DUF4249
Motif
Other DBs
NCBI-ProteinID:
UQR60141
UniProt:
A0AB38S453
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All DBs
Position
complement(5167552..5168583)
Genome browser
AA seq
343 aa
AA seq
DB search
MGETVTIQKNWQELIRPNKLQVSPGSDPSRFATIVAEPLERGFGQTLGNALRRILLSSLQ
GAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKQGPGVVTA
GDIQTVGDVTVLNPDLQICTLDEGAEIRMEFTVSTGKGYVPAERNRPEDAPIGLIPVDSL
YSPVRKVSYKVENTREGQILDYDKLTMTIETNGAISPDDSVAYAARILQDQLNVFVNFEE
PRKEVAQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPN
FGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaacagtgacgatccagaaaaattggcaagaactgattcggccgaacaagctc
caggtgtcccccggcagcgatccctcgcgtttcgcgaccatcgtcgccgagccgctcgag
cgcggcttcggccagaccctcggcaacgccctgcgccgcatcctgctctcctcgcttcag
ggcgcggcagtgcagtcggtgcatatcgacggcgtgctgcacgagttctcctcgattgcg
ggcgtccgtgaggacgtcaccgacatcgtgctcaacatcaaggacatctcgatcaagatg
cagggcgaaggccccaagcgcatggtcgtgaagaagcaggggccgggcgtcgtcaccgcc
ggcgacatccagaccgtcggcgatgtcaccgtgctcaacccggacctgcagatctgcacc
ctcgacgagggcgcggagatccgcatggagttcacggtctcgaccggcaagggctacgtg
cccgccgagcgcaaccgccccgaggatgcgccgatcggtctgatcccggtcgacagcctc
tactcgccggtccgcaaggtctcctacaaggtcgagaacacccgcgagggccagatcctc
gactacgacaagctgaccatgacgatcgagaccaacggcgcgatctcgccggatgactcg
gtggcctacgccgcgcgcatcctgcaggatcagctcaacgtcttcgtcaatttcgaagag
ccgcgcaaggaagtcgcccaggagatcatcccggacctcgccttcaacccggccttcctc
aagaaggtggacgagctcgagctgtcggtgcgttcggccaactgcttgaagaacgacaac
atcgtctatatcggcgacctcgtgcagaagtcggaagccgaaatgctccgcaccccgaac
ttcggccgcaagtcgctgaacgagatcaaggaagtgctggcccagatgggtctgcacctc
ggcatggaagtgccgggctggccgccggagaacatcgacgagctcgccaagcgcttcgaa
gatcactactga
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