Bradyrhizobium sp. C-145: LRP30_25295
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Entry
LRP30_25295 CDS
T09672
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
braz
Bradyrhizobium sp. C-145
Pathway
braz03420
Nucleotide excision repair
braz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
braz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LRP30_25295
03430 Mismatch repair
LRP30_25295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
braz03400
]
LRP30_25295
Enzymes [BR:
braz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LRP30_25295
DNA repair and recombination proteins [BR:
braz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LRP30_25295
MMR (mismatch excision repair)
Other MMR factors
LRP30_25295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
HHH
AAA_12
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UQR60319
UniProt:
A0AB38S4N3
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All DBs
Position
5361541..5363598
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AA seq
685 aa
AA seq
DB search
MATYLDTLNAEQRRAVEHGVAEGATVGAPLLVIAGAGSGKTNTLAHRVAHLIVAGADPRR
ILLMTFSRRAAAEMAGRVERIARKVLGENNAAIMRDALTWAGTFHGIGARLLREYAERIG
IDPAFTIHDREDSADLMNLVRHERGLSKTESRFPAKGTCLSIYSRCVNAEMEIEKVLGVH
YPWCAGWAAELKGLFAAYVEAKQAQHVLDYDDLLLYWSQMMSDALIAEEIGGRFDHVLVD
EYQDTNRLQSSILLALKPDGRGLTVVGDDAQSIYSFRAATVRNILEFPQSFSPRAEMITL
DRNYRSTQAVLAAANGVIGLARERFTKNLWTDRASSHKPQLVTVHDEADQARYIVEQVLA
NREQGALLKHQAVLFRTSSHSGPLEIELTRRNIPFVKFGGLKFLDAAHVKDVLALLRFAE
NPRDRVAGFRILHLLPGIGPATAQRVLDQMAESTDPLAALGQLPAPARAGADWTDFVRTT
QNLRYSEWPVDLERVRLWYEPHLDRIHEDAETRRADLMQLEQIASGYASREKFLTELTLD
PPDATSDKSGPPLRDEDYLILSTIHSAKGQEWKSVFVLNVVDGCMPSDLGAGTSAELEEE
RRLLYVAMTRAKDDLHLVVPQRFFVHGQTAKGDRHVYASRTRFIPEQLVYLFERTAWPKA
AAGAGRTAAQGPKIDIGAKMRGMWR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacatatctggacacgctcaatgcggagcagcgccgcgccgtcgagcatggcgtg
gccgaaggcgcgaccgtgggcgctcccctgctcgtcattgccggtgccggctccggcaag
accaacacgctcgcccaccgcgtcgcgcatctgatcgtcgcaggcgccgatccgcgccgc
atcctgttgatgacgttctcccgccgcgccgcggccgagatggccggccgcgtggaacgc
atcgcccgaaaagtgctgggtgagaacaacgccgcgatcatgcgcgatgcgctcacctgg
gccggcaccttccacggcatcggtgcgcggctcttgcgcgaatatgccgagcgcatcggc
atcgatcccgccttcaccatccacgaccgcgaggactccgccgacctgatgaacctggtc
cggcacgagcgcggcctgtcgaaaaccgagagccgcttccccgccaagggcacgtgcctg
tcgatctactcgcgctgcgtcaatgccgagatggagatcgagaaggtgttaggggtgcac
tatccctggtgcgccggctgggcggccgagctgaaaggcctgttcgcggcctatgtcgag
gccaagcaggcccagcacgtgctcgattacgacgatcttctgctctactggtcgcagatg
atgagcgatgcgctgatcgcggaagagatcggcggccgcttcgatcacgtgctggtcgac
gaataccaggacaccaaccgcctgcaatcctcgatcctgctggcgctgaaacccgacggc
cgcggcctcaccgtggtcggcgacgacgcacagtcgatctattcgttccgtgccgccacc
gtgcgcaacatcctggagtttccgcagagcttctcgccgcgcgcggaaatgatcacgctc
gaccgcaattaccgctcgacccaagcggtgctggcggcggccaacggcgtcatcgggctc
gcgcgcgagcgcttcaccaagaacctctggaccgaccgcgcctcgtcgcacaagccgcag
ctcgtcaccgtgcacgacgaggccgaccaggcccgctacatcgtcgaacaggtgctggcc
aatcgcgagcaaggcgcgctcttgaagcaccaggcggtgctgttccgaacctcctcgcat
tccggcccgctggagatcgagctgacccgccgcaacattcccttcgtcaagttcggcggg
ctgaaattcctcgatgcagcgcacgtcaaggacgtgctggccctcttgcgtttcgcggag
aatccgcgcgaccgcgtcgcaggcttccgcatcctgcatctgttgccgggcatcggaccc
gccacggcgcagcgcgtgctcgaccagatggccgaaagcaccgatccgctggccgcgctc
ggtcagcttccggcgcctgctcgcgccggcgccgattggaccgacttcgtccgcacgacc
cagaatttgcgctactcggaatggccggtcgatctcgagcgcgtacggttgtggtacgag
ccgcatctcgaccgcattcatgaggatgccgagacgcggcgtgccgatttgatgcagctc
gagcagatcgcgagcggctacgcctcgcgcgagaaatttttgaccgagctcacgctcgat
ccacccgatgcgaccagcgacaaatccgggccgcccttgcgcgacgaggactacctgatc
ctctccaccatccattccgccaagggccaggaatggaagtcggtgttcgtgctcaacgtc
gtcgacggctgcatgccgtccgacctcggcgccggcaccagcgccgagctcgaggaggag
cgccgcctgctctatgtcgcgatgacgcgcgccaaggacgatcttcatcttgtcgtgccg
cagcgcttcttcgtccacggccagaccgccaagggcgaccgccacgtctacgcctcgcgc
acccgcttcatcccggagcagctggtctacctgttcgagcgcaccgcctggccgaaggcc
gctgccggcgcaggccgcaccgcggcgcagggcccgaagatcgacatcggcgcgaagatg
cgggggatgtggcggtag
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