Bradyrhizobium sp. C-145: LRP30_29345
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Entry
LRP30_29345 CDS
T09672
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
braz
Bradyrhizobium sp. C-145
Pathway
braz00521
Streptomycin biosynthesis
braz00523
Polyketide sugar unit biosynthesis
braz00525
Acarbose and validamycin biosynthesis
braz00541
Biosynthesis of various nucleotide sugars
braz01100
Metabolic pathways
braz01110
Biosynthesis of secondary metabolites
braz01250
Biosynthesis of nucleotide sugars
Module
braz_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
braz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LRP30_29345 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LRP30_29345 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LRP30_29345 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LRP30_29345 (rfbB)
00525 Acarbose and validamycin biosynthesis
LRP30_29345 (rfbB)
Enzymes [BR:
braz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LRP30_29345 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
UQR61060
UniProt:
A0AB38S6J8
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Position
complement(6213340..6214398)
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AA seq
352 aa
AA seq
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MRVLVTGGAGFIGSAVCRSLVLQKGAAVINVDKLTYAANSASLASIEGLKSYLFEQQDIC
DRGAMDFVFSSYQPDAIIHLAAESHVDRSITGSAAFIATNIVGTYTLLEAARNYYEGLSV
PRRKRFRFVHVSTDEVYGSLGLADYFREETAYQPSSPYSASKAASDHLALAWFKTYGLPV
IVSNCSNNYGPFQFPEKLIPLMILNAIERKPLPVYGDGRNVRDWLHVEDHAAGLITLLSE
GKPGEKYNFGGDSERSNLDVVTQICDVVDRLYPGPATRRLMITFVPDRPGHDVRYAIDAS
KARRELGWRPTRTFEQGLTETVAWYLKNRAWWERARSRVYDGSRLGLLATQH
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttctggtgaccggcggagcgggatttatcggctctgcagtgtgccgtagcttg
gtgctgcagaagggcgccgcagtaatcaatgtcgacaagctgacctatgcggccaactca
gcctcgttggcgtctatcgaggggctaaagtcatacttgttcgagcagcaggatatctgc
gaccgcggggccatggatttcgtgttcagcagctaccagcccgatgcgatcattcacctc
gcagccgagagtcacgtcgaccgctcgatcaccggatcggccgctttcattgccacgaat
atcgtgggcacctacacgttgttggaagcagccagaaattactatgagggcctctcggtg
ccacgacgaaagcggtttcgcttcgttcacgtctcgacagacgaggtctacggctcactc
ggacttgccgactacttccgggaggaaacggcttaccagccgagttcgccctattcggcg
agcaaggcagcctcggatcatctcgcgcttgcatggttcaagacctatggcctgccggtc
attgtgtcgaattgctcgaacaactatggcccgtttcaatttccagaaaagctcatccct
ttgatgattcttaatgcgatcgagcgcaagccgctgccggtgtacggcgacggccgaaac
gtacgcgattggctgcatgttgaagaccatgcggcaggtttgataacgctactgtcggaa
ggcaagcccggcgagaagtacaatttcggcggcgatagcgaacgctccaacctcgacgtg
gtcacccagatctgcgacgtcgtcgacagactgtatcccggtccggcaacgagacgattg
atgattacctttgtgccggatcgtccgggacacgatgtccgctacgcgattgacgcatcg
aaagctcgccgtgagctcggctggcgtcccacaaggacgttcgagcaggggctgaccgaa
acagtcgcatggtatctcaagaaccgcgcgtggtgggagcgtgcccgcagcagggtttat
gacggctcacgtctagggctcttggccacacaacattga
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