Bradyrhizobium sp. C-145: LRP30_29660
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Entry
LRP30_29660 CDS
T09672
Name
(GenBank) VCBS domain-containing protein
Organism
braz
Bradyrhizobium sp. C-145
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_4
FG-GAP_3
FG-GAP
HemolysinCabind
GEX2
Motif
Other DBs
NCBI-ProteinID:
UQR61116
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All DBs
Position
complement(6275946..6283247)
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AA seq
2433 aa
AA seq
DB search
MATQTSGGSTTSFGNTPQANNDIFTFTEEANNILILNVMANDLGGAAKTLFSLDDGTSTS
ASTKSYAPADLLVKDVSYSSDAAGAAGTSDHSALGARIWIESDGTVHYDKGDINSLLQGL
AVGQTLNDSFTYAIQLGNGTLSWATVTLQFSGANDSVYITSSPQSGAVVEDAATTPAPSD
SLTAAGTISFTDADLSDTHTASFVASPTNTTSLGMFSLDPGNEAANAADGSVQWHYALNS
AAAQYLAQGQSVAESYVVTVNDGHGSTTTQTVTVTITGTNDAPVITAQDLSGAVTELVTP
AGNLADSGTISFTDVDLTDVHLVSATGTPIGSVLGSLTAVKDSDTTGTGTGGQLTWTYTV
AASAVEYLAAGQTKVESFTITLDDQNGGLITKQIDVTITGTNDAPVITAQDLSGAVTELV
TPAGNLADSGTISFTDVDLTDVHLVSATGTPIGSVLGSLTAVKDSDTTGTGTGGQLTWTY
TVAASAVEYLAAGQTKVESFTITLDDQNGGLITKQIDVTITGTNDAPVITAQDLSGAVTE
LVTPAGNLADSGTISFTDVDLTDVHLVSATGTPIGSVLGSLTAVKDSDTTGTGTGGQLTW
TYTVAASAVEYLAAGQTKVESFTITLDDQNGGLITKQIDVTITGTNDAPVITAQDLSGAV
TELVTPAGNLADSGTISFTDVDLTDVHLVSATGTPIGSVLGSLTAVKDSDTTGTGTGGQL
TWTYTVAASAVEYLAAGQTKVESFTITLDDQNGGLITKQIDVTITGTNDAPVITAQGGSL
SYTENQAATAIDTALLVSDVDSPTLIGATVSITGNFASGQDVLDFTNQNGITGSYNASTG
LLTLSGTTTVANYQAALRSVAYFNSSDNPSGASRTISYQVDDGSASNHASNVATATVAVT
SVNDAPTLTATASSPAFTEGAGSSQAAAVTVFSGTSISTVEAGQTIKTLKFTVSGLVDGA
NEKIAVDSSTFSLTNGTSGTTTGGNSLGYSVSVSGATATVTLTSAAGISASTAQTVVNGI
AYQDTNINDPTAGTRTVTLTSIQDSGGTANGGTDTTGLSIASNVTVTPVNDAPTLTATAS
SPTFTEGAGSSQAAAVTVFSGTSISTVEAGQTIKGLTLTVGGLVDGSNEKIVVDGTTFSL
TNGTAGTTSGGNSLGYSVSVSGATATVTLTSAGGISTSAAQTVVNGIAYQDTNVGNPTAG
ARTITLTSIQDSGGTANGGVDIKSLSTFAELTGSNNPLNGVDVGDYANPAFVDLNGDGKL
DVVIGADNGTLLYYRNTGTATAPAYVQEAGPSNPFNTVDIGLHADPTFVDLDGDGDLDAV
VGEFGATLLYFKNTGTATAPVFTQQTGANNPFNGITVGGSGSHYSAPVFADLDGDGDKDA
VVGAQDGTLYYFKNTGTASAPVFTAQSGANNPFNGITVGSYSNPTLLDVDGDGKLDVVVG
ASDGTLHYLRNVGTSTAPAFVEQTGSNNPFNGLDFGDFSGPTFVDIDGDGKPDAFIGTSN
GQLHYLHNVTASSTVNVFAVNDAPVNSIPGAQGVGINTSFSFSSANGSAVSISDVDVGAG
SEKVTLSVSHGTLTLSTTSGLSFTAGDGTSDASMTFSGTITSINNALNGLVYTPTASFTG
TDTFTITTDDQGSTGSGGALSDTDNVTINVQNTALTSGPDILTFTAGTNSVTATNNTLNN
GDKLTGGTGVDTLTIPNNQPGPFTFGDGTGSTVGVRNFEKIVLNDTSTGTHTDTVTFAAS
FSNGSTITIDGTPITGNAKLSFDASATSNAFVVLGGSNNDTIVGGSGNDIFIGKSGNDTL
TGNGGADQFRLQTNGGTDVITDYTQGTDKIGLLGGAALGGVSFTNTSASAAGTTLNSGDF
NNTRTSIAGINAADDNHVDVLTSSQTTSNITTNNGGAATNAYVIVFNSTTGHGEIWFDTD
WSNTANRVQVATLSNIMTLAGVTAITNTDLVVYDSTLGPAGVAGSSMNMGLLGSISGLVG
PATIALDAVPADWVLSGGIQSAGSWTIQTNDLSSVNLNTPVNFTGAALLNVTVSWSNADG
SAGLATLQENIEVYAPGTPIFALSGDDHLTGHPGSDLFVFSQPIGKDVVHSFEVSSDVID
LISYGWQSFADVQAHTADDTSGNAVITLADGQTITLDGVHAADLTAANFEFDVTPTVDNP
GAMTIGDGAMLPLSGIIHNTGEIDLQSSGDDTLLQLIQTGIKLEGGGLVTLSDDDHNIIA
GTASNVTLDNVDNVISGAGQIGQGSLTLSNERTIDATGTHALVIDTGANVIANAGTLEAT
GAGGLVLESAVANSGMIWANGGTVTAEGEVTGSGNALISGAGTIEFGAGSTAGVTFDVTA
AGHLILDDAFHFSGAVSGLDGNDDIGIKGIAFGAATTVSFTENEAGTGGTLTVSDGAHTA
NIILLGQYDPTGFSTKGDATNDAVIAYDPHHIA
NT seq
7302 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcagacgagcggtggaagcacgacttcgtttggaaatacccctcaagccaac
aacgacatcttcacattcacggaagaagccaacaacattctgatactgaatgtgatggcg
aacgatctgggcggcgcagcaaagacgctgttctccctggatgatggaacgagtacctcg
gcgtcgaccaagtcctatgcacctgcggatctgctggtcaaagacgtaagctacagcagt
gacgcagctggtgcggccggaacgagcgatcatagtgcgctgggtgcgaggatctggatc
gagtcggatggcaccgttcactacgacaagggcgacatcaattcccttcttcaggggctc
gccgttggtcaaacactgaatgattcttttacttacgccattcagctcggcaacggtacg
ctcagctgggccacggtgacgctgcagtttagcggcgcaaacgattcggtttatattacg
tcgagcccacagagcggcgcagttgtggaggacgcggcgacgacgccggccccttcagat
tcgctgaccgcggccggaacgataagcttcaccgatgcggacctgagcgatacgcacacc
gcaagttttgtggcgtcgcccacgaatacgacctcgctggggatgttttcgctcgatccg
ggtaacgaggcagccaacgcagcggatggttcggtgcagtggcactacgcgctgaatagt
gccgctgcgcagtatctcgcacaaggccaaagtgtggccgagagctatgtagtgacggtc
aatgacggccacggctcgaccacgacccagacggtgaccgtcaccatcaccggcaccaac
gacgcgcccgtgatcaccgcgcaggatctcagcggcgcggtcaccgagctcgtcaccccg
gccggcaacctggccgacagcggcaccatcagcttcaccgacgtcgacctcaccgacgtg
catctggtttccgccaccggcaccccgatcggctccgtgctcggctcgctcaccgcggtc
aaggacagcgacaccaccggcacaggcaccggcggccagctcacctggacctacacggtt
gcggcctcggccgtggagtatctcgccgccggccagaccaaggtcgagagcttcaccatc
acgctcgacgaccagaacggcggcctgatcaccaagcagatcgacgtcaccatcaccggc
accaacgacgcgcccgtgatcaccgcgcaggatctcagcggcgcggtcaccgagctcgtc
accccggccggcaacctggccgacagcggcaccatcagcttcaccgacgtcgacctcacc
gacgtgcatctggtttccgccaccggcaccccgatcggctccgtgctcggctcgctcacc
gcggtcaaggacagcgacaccaccggcacaggcaccggcggccagctcacctggacctac
acggttgcggcctcggccgtggagtatctcgccgccggccagaccaaggtcgagagcttc
accatcacgctcgacgaccagaacggcggcctgatcaccaagcagatcgacgtcaccatc
accggcaccaacgacgcgcccgtgatcaccgcgcaggatctcagcggcgcggtcaccgag
ctcgtcaccccggccggcaacctggccgacagcggcaccatcagcttcaccgacgtcgac
ctcaccgacgtgcatctggtttccgccaccggcaccccgatcggctccgtgctcggctcg
ctcaccgcggtcaaggacagcgacaccaccggcacaggcaccggcggccagctcacctgg
acctacacggttgcggcctcggccgtggagtatctcgccgccggccagaccaaggtcgag
agcttcaccatcacgctcgacgaccagaacggcggcctgatcaccaagcagatcgacgtc
accatcaccggcaccaacgacgcgcccgtgatcaccgcgcaggatctcagcggcgcggtc
accgagctcgtcaccccggccggcaacctggccgacagcggcaccatcagcttcaccgac
gtcgacctcaccgacgtgcatctggtttccgccaccggcaccccgatcggctccgtgctc
ggctcgctcaccgcggtcaaggacagcgacaccaccggcacaggcaccggcggccagctc
acctggacctacacggttgcggcctcggccgtggagtatctcgccgccggccagaccaag
gtcgagagcttcaccatcacgctcgacgaccagaacggcggcctgatcaccaagcagatc
gacgtcaccatcaccggcaccaacgacgcgcccgtgatcaccgcgcagggcggctcgctg
tcctataccgaaaaccaggcggcgacagccatcgacacggcacttctggtgtcggacgtc
gatagcccgactctgatcggggcaacggtgtcgatcaccggcaacttcgcatccggccag
gatgtgcttgacttcaccaaccagaacggcatcaccggcagctacaacgcctcgaccggc
ctgctgacgttgagcggcacgacgacggttgcgaactaccaggcggccctgcgttcggta
gcctacttcaactcgagcgacaatccgtccggcgcgagccgcaccatcagctaccaggtc
gatgacggctccgcttcgaaccatgccagcaacgtcgcaaccgccacggttgcagttacc
tcggtgaacgacgcgccgacgctgacagcgacggcatcgagcccggcctttacggaaggg
gcgggcagttcgcaggcggcagcggtgacggtgttctccggaacgagcatcagcacggtt
gaggccggccagaccatcaagaccctgaagtttacggtgagcgggctggtcgatggcgcc
aacgagaagattgccgtcgacagctcgacgttcagtctgaccaacggaacgagcggcacg
acgacaggtggcaacagtctcggctacagcgtatcggtgagcggcgccaccgcaaccgta
acgctcacaagcgcggccggtatctcggcgtccacggcgcagacggtcgtcaacggcatc
gcctatcaggacaccaacatcaatgacccgaccgcaggcacacggacggtcacgctgacc
tcgatccaggacagcggcgggaccgccaacggcggcaccgataccacaggtctgtcgatc
gcatccaacgtgacggtcacgccggtgaacgacgcgccgacgctgacagcgacggcatcg
agcccgacctttacggaaggggcgggcagttcgcaggcggcagcggtgacggtgttctcc
ggaacgagcatcagcacggttgaggccggccagaccatcaagggcctaaccctcacggtc
ggtggcctggtcgatggcagcaacgagaagatcgtcgtcgacggcaccacgttcagcctg
acaaacgggaccgccggcacgaccagcggtggcaacagcttgggctatagcgtctcggtt
agcggtgcgaccgcaacagtgacgttgaccagcgcaggcgggatctcgacctctgcggcc
cagacagtcgtcaatggcattgcttatcaggacaccaatgttggtaacccaaccgcggga
gcgcggacgatcacgctgacctcaatccaggacagcggtgggacggcaaatggcggtgta
gacatcaagagtctgtcgacctttgctgaactaaccggatccaacaatcctctcaacggt
gtcgatgtcggggattatgcgaaccccgcattcgtcgacctgaatggtgatggcaagctc
gatgtggtgatcggggctgacaacgggacgctgctgtattaccgcaatacggggactgcc
accgctccggcttatgtacaagaggccggacccagcaacccattcaatacagtcgatatt
gggctacacgccgatccgacctttgtcgatcttgatggtgatggcgacctcgacgcggtg
gtaggcgagttcggtgcgacgctcctctacttcaaaaatactggcacggcgaccgcaccg
gtatttacccagcaaactggagccaacaatccatttaatgggatcacggtaggcggttcg
ggcagccactattccgctccagttttcgccgatctcgatggcgatggcgacaaggatgct
gtcgtcggagcgcaagacggcacgctctactactttaagaacacgggaacggcatcggcg
cccgttttcaccgcccaaagtggcgctaacaatccctttaatggcatcactgtcggatcc
tattcgaacccgacgctcctcgatgtcgacggtgacggcaagttggatgtcgtcgtcggc
gcaagcgatggaacgctccactaccttagaaacgttggaacctccactgcaccggccttt
gttgagcaaaccggtagcaacaatccatttaatgggttggactttggagatttttcaggc
ccaacgtttgtcgatatcgatggagatggcaagccggatgccttcatcggtacttcgaac
ggccaacttcattacctccacaacgttacggcttcgagcactgtaaacgtctttgccgtg
aacgacgcaccggtgaattcaattcctggagctcaaggcgtcggaatcaacacgagcttc
tcgttcagcagtgcgaatggaagtgcggtttccatctcagacgttgacgtcggcgccggg
agcgagaaggtaacgttgagtgtcagtcatggcacgttgacgctttccacgacgagcggt
ctctcctttactgcgggagacggtacatccgatgcgtcgatgacattctcaggaaccatc
actagcataaacaacgccttgaatggcttggtctacactccaacggcgtcgttcaccggg
acagataccttcacaatcaccaccgacgatcagggcagcacgggttccggcggcgccctt
tccgatacagacaacgtcacaatcaatgtacagaacacggcgctcacgtccggtcccgat
attctaacctttacggcaggaacgaattcggtgaccgcaacaaataacaccctaaacaat
ggggataaactaaccggaggaacaggcgtagatacccttacgattccgaacaaccagcca
gggccattcacgtttggcgatgggactgggagcacagtgggtgtaaggaacttcgagaag
atcgtgctgaatgacaccagcacgggaactcataccgacaccgtgacttttgccgcctca
ttcagcaacggcagcaccatcacaatcgatgggacgccgatcacgggcaacgcgaagctt
agctttgatgcttccgcgacctccaatgcctttgttgttctgggaggatcgaacaatgat
acgatcgtgggtggttccgggaatgacatatttattggtaagtcgggcaatgacacgctg
accgggaatggtggtgccgaccagttccgtttgcaaaccaacggtggtacggacgttata
accgattatacgcagggcaccgataagatcgggcttctcggcggcgctgctttgggtggc
gttagctttacaaatactagcgccagtgctgctggtacgacgcttaacagtggtgacttt
aataacacacggacaagcatcgctggcatcaatgctgccgacgacaatcacgtagatgtt
ctaacttcttcgcaaacaacttccaacatcacgaccaacaatggtggagctgcgaccaat
gcgtatgtgattgtgtttaactcaacgacgggacacggggagatttggttcgacacggac
tggagcaatacagcaaacagagtccaagttgcgacgctcagcaacatcatgaccttggct
ggtgtgacagcgatcacgaatacggacctggtcgtttacgatagtacccttgggccagct
ggcgtagctggttcgtcgatgaacatgggtctgctcggttcgatctcaggccttgttgga
ccggcaactatcgcactagacgcggtgcccgcggattgggtgctatccggcgggattcaa
tccgctggtagttggaccattcaaactaacgatctgtcttcggtaaatttgaataccccg
gtcaatttcaccggggcggctctcctaaacgtgactgtgagttggtctaatgcggatgga
agcgcagggctggcaacgcttcaggaaaacatcgaggtctatgccccaggcacaccgatt
tttgctctttctggagatgatcatctcactgggcacccaggtagcgatctcttcgtgttc
tcgcagccgatcggcaaggacgtcgtgcacagcttcgaggtgtcctccgacgtcatcgac
ctgatcagctacggctggcagagcttcgcggacgtccaggcccacaccgcggacgacacg
agcggtaatgctgtgatcacgctggccgacggccagacgatcactctcgatggcgtgcat
gcggcggacctgaccgcggcgaacttcgaattcgacgtgacgccgactgtcgacaatcca
ggcgcgatgacgatcggcgacggcgcgatgctgccgctgtccgggatcatccacaacacg
ggcgagatagacctgcagagttcgggcgatgacacgctgctgcaactgatccagaccggc
atcaaactggaaggcggtggcctcgtgacactgtcggacgatgaccacaacatcatcgcc
ggcacggcttccaacgtcacgctcgacaacgtcgacaacgtgatctctggcgcgggccag
atcggccagggcagcctgacgctcagcaacgaacgcaccatcgatgccacgggcacccat
gccctggtgatcgataccggtgccaacgtgatcgccaatgccggcacgctggaggcgacc
ggtgcgggtgggctcgtccttgagagtgctgtggccaacagcggcatgatctgggccaat
ggtggcaccgtcacagcagaaggcgaggttaccggcagcggcaatgcactgatcagcggg
gccggcaccatcgagttcggggcaggctcgacggcaggcgtcaccttcgatgtgacggcc
gccggccacctgattctggacgacgccttccacttctccggagcggtgagcggcctcgat
ggcaatgacgacatcggcatcaagggcatcgccttcggcgcggccacgacggtgagcttc
acggaaaacgaggcggggacgggcggtactctgacggtctcggatggcgctcacaccgca
aacatcatcctgctcgggcaatacgatccgacgggttttagtacaaaaggagacgccacg
aacgatgccgtgattgcctatgacccgcatcacatcgcctga
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