Bradyrhizobium sp. C-145: LRP30_40565
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Entry
LRP30_40565 CDS
T09672
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
braz
Bradyrhizobium sp. C-145
Pathway
braz03030
DNA replication
braz03430
Mismatch repair
braz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
braz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LRP30_40565
03430 Mismatch repair
LRP30_40565
03440 Homologous recombination
LRP30_40565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
braz03032
]
LRP30_40565
03400 DNA repair and recombination proteins [BR:
braz03400
]
LRP30_40565
Enzymes [BR:
braz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LRP30_40565
DNA replication proteins [BR:
braz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LRP30_40565
DNA repair and recombination proteins [BR:
braz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LRP30_40565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF5710
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UQR62964
LinkDB
All DBs
Position
complement(8631776..8632672)
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AA seq
298 aa
AA seq
DB search
MFQDMTDMAALAEALAGSPDYRVLRRLVPRPLSAPPGGLETRVGILLDTETTGLDHAKDE
IIELGMVKFDYTLDGRIVGVRNTFSAFNEPSAPISAEVTALTGITDEMVAGHRFDDAAIA
AFVDDAVIIIAHNSGFDRKFAERYWPVLEHKAWGCSMSEVDWRKHGFAGTQLAYLLHGAG
YFHQAHRAVDDCHALLEILDFTLPTTGAPALAALLENARKPTVRVWAEQSPFELKDSLKR
RGYRWSDGTDGRPKSWYVDVGESAVDDELAFLKAEIYLRDVEPRLQTLTAFTRFSCRV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacatgacggacatggccgccttggccgaggcactcgccggctcaccggac
taccgggtgctgcggcgactggtaccgcggcccctgtccgcgccccccggcggactggag
accagggtcggcattttgctggacaccgagacgaccggcctcgatcacgcgaaggacgag
atcatcgagctcgggatggtcaagttcgactatacgctcgatggcaggatcgtcggcgtc
cgcaacaccttctccgccttcaacgagccgagcgcgccgatctccgcggaagtgacggca
ctcacgggcatcaccgacgagatggtggctggtcacagattcgacgatgcggccatcgcg
gccttcgtagacgacgcagtcatcatcatagcgcacaacagcggcttcgatagaaaattc
gccgaacggtattggcctgtgcttgagcacaaggcctggggctgcagcatgagtgaggtc
gactggcgcaaacacggcttcgcgggcacccaactcgcctatctgctgcacggagccggt
tatttccaccaggcccacagggccgtggacgactgccacgcgttgctggagatcctagac
ttcacgctgccgacgaccggcgcgccggcactcgccgcgctactggagaacgcccgcaag
ccaacggtgcgggtatgggccgagcagtcgccgttcgagttgaaggattcgctgaaacgc
cgcgggtaccgctggagtgacggcactgacggccggcccaagtcctggtacgtcgacgtc
ggcgagtccgccgtcgacgacgaactcgcgttcctgaaggcggagatctacctgcgcgac
gtcgagccgcgcctgcagacgttgacggctttcacccggttctcctgcagggtctga
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