Bradyrhizobium sp. C-145: LRP30_43290
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Entry
LRP30_43290 CDS
T09672
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
braz
Bradyrhizobium sp. C-145
Pathway
braz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
braz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LRP30_43290 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
braz03019
]
LRP30_43290 (recQ)
03400 DNA repair and recombination proteins [BR:
braz03400
]
LRP30_43290 (recQ)
Enzymes [BR:
braz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LRP30_43290 (recQ)
Messenger RNA biogenesis [BR:
braz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LRP30_43290 (recQ)
DNA repair and recombination proteins [BR:
braz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LRP30_43290 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HHH
Motif
Other DBs
NCBI-ProteinID:
UQR63456
UniProt:
A0AB38SDR1
LinkDB
All DBs
Position
complement(9190339..9192204)
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AA seq
621 aa
AA seq
DB search
MSSPSTAPLPAPANGRDALSVLHSVFGLPGFRGAQGEIIRHVTDGGNCLVLMPTGGGKSL
CYQLPSLLREGCGIVVSPLIALMRDQVAGLIEAGVNAAALNSSLTPQEASEVERRLIAGD
LDLLYVAPERLVTPRCLSMLAQAKVALFAIDEAHCVSQWGHDFRPEYVGLSIIAERFPDV
PRIALTATADELTRKEIVARLQLTGAPQFVSSFDRPNIRYEIVDKRNAVSQLKEFIRERH
MGDAGVVYCLSRNRVEEVAAALQDAGIAALPYHAGLDSSVRSRNQDRFLNEDGIVIVATI
AFGMGIDKPDVRFVAHLDLPKSIEAYYQETGRAGRDGKPSAAWMAYGLSDIVQQRRMIDE
SAASDDFKRVSIGKLDALVGLAETPHCRRRRLLAYFGEIVMGESCGNCDNCLTPPKMRDG
KVLAQKLLSCVYRTGQRFGAMHLIDVLVGRLTEKVTQFGHDKLSVFGIGRELNEKQWRTV
LRQLVAMGHLQSDSEAFGALKLTDSSRGVLRGEAEVWLREEAPGTRIRSSRAKSRRGDLA
PAASAPQGDVDPELRARLRSWRSDIARERGVPAYVVLHDATIDGIVRAWPTTLDELRNVP
GIGDKKLEHYGDELLQIIRTR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccttccaccgctccactgccagcgccggccaacggccgcgatgcgttgtcg
gtgctgcattcggtgttcggactgccggggttccgcggcgcgcagggcgagatcatccgg
cacgtgacggatggcggcaattgtctggtgctgatgccgactggcggcggcaagtcgctc
tgctatcagctcccctcactgctgcgcgagggctgcggcatcgtggtctcgccgctgatc
gcgctgatgcgcgaccaggtcgccggcctgatcgaagccggcgtcaacgcggccgcgctg
aactcgtcgctgaccccgcaggaggcctcggaggtggagcggcgcctgatcgcgggcgat
ctcgacctgctctatgttgcgccggaacggctggtgacgccgcgctgcctgtcgatgctg
gcgcaggcgaaggtggcgctgttcgcgatcgacgaagcccattgcgtctcgcaatggggc
cacgatttccggcccgaatatgtcggtctgtccatcatcgccgagcgctttcccgacgtc
ccccgcatcgcgctgaccgcgaccgccgacgagctgacgcgcaaggagatcgtggcgcgg
cttcagctaacaggcgccccgcaattcgtctccagcttcgaccggcccaacatccgatac
gagatcgtcgacaagcgcaatgcggtctcgcagctgaaggaattcatccgcgagcgtcac
atgggcgatgccggcgtggtctattgcctgtcccgcaaccgcgtcgaggaggtcgcagcc
gcgcttcaagacgccggcattgccgcgctgccctatcatgccggcctcgatagcagcgtg
cgttcgcggaaccaggaccgcttcctcaacgaagacggcatcgtcatcgttgcgaccatc
gcgttcggcatgggcatcgacaagcccgacgtgcgcttcgtcgcccatctcgatctgccc
aagagcatcgaggcctattatcaggagacgggacgcgccggccgcgacggcaagccgtcg
gccgcctggatggcgtatggcctctcggacatcgtgcagcagcgccgcatgatcgacgaa
tcggctgcgtctgacgatttcaagcgggtctcgatcggcaagctcgacgcgctggtcggt
cttgccgagacgccgcactgccggcgccggcggctgctcgcctatttcggcgagatcgtg
atgggtgagagttgcggtaattgcgataattgcctgacgccgccgaagatgcgcgacggc
aaggtgctggcgcagaagcttttgtcctgcgtctaccgcaccgggcaacgttttggcgcg
atgcacctgatcgacgtgctggtcgggcgcctgaccgagaaggtgacgcagttcggccac
gacaagctgtcggtgttcggcatcggccgcgagctcaacgaaaagcagtggcgcacggtg
ctgcggcaattggtggcaatggggcatttgcagagcgacagcgaagcattcggcgcgctg
aagctgacggattcttcgcgcggcgtgctgcgcggtgaagcggaggtgtggctgcgcgag
gaagcgcccggcacccgcatccgctcgagccgggccaaatcgcgccgcggcgacctcgcg
cccgcggcgagcgcgccgcaaggcgatgtcgatcccgaattgcgcgcgcggctgcgctcc
tggcgttccgacatcgcccgcgagcgcggcgtgcccgcctatgtcgtgctgcacgatgcc
accatcgacggcatcgtccgggcctggccgacgacgctggacgaactgcgcaacgtgccc
ggcatcggcgacaagaagctcgagcactacggcgacgagctgctgcagatcatcaggacg
aggtag
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