Bradyrhizobium sp. C-145: LRP30_44140
Help
Entry
LRP30_44140 CDS
T09672
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
braz
Bradyrhizobium sp. C-145
Pathway
braz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
braz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LRP30_44140 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
braz03019
]
LRP30_44140 (pnp)
03016 Transfer RNA biogenesis [BR:
braz03016
]
LRP30_44140 (pnp)
Enzymes [BR:
braz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LRP30_44140 (pnp)
Messenger RNA biogenesis [BR:
braz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LRP30_44140 (pnp)
Transfer RNA biogenesis [BR:
braz03016
]
Prokaryotic type
tRNA degradation factors
LRP30_44140 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
DUF5813
Motif
Other DBs
NCBI-ProteinID:
UQR63610
UniProt:
A0AB38SDW4
LinkDB
All DBs
Position
9382312..9384474
Genome browser
AA seq
720 aa
AA seq
DB search
MFNKHSVEIDWGGRPLKLETGKIARQADGAVIATYGETVVLATVVAAKAPREGVDFLPLT
VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSH
DMENDPDIVAMVAASAALTLSGVPFKGPIGAARVGFANDEFVLNPTLDEMVDTQLDLVVA
GTADAVLMVESEAKELNEDVMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTAIDNSA
IEKEMLGLIEQELRAAYAIPVKQERYAAVGVAKEKVMAHYFPEGQEPKYDKLRIAGVFKE
LEAKIVRWNVLDTGKRIDGRDVKTVRNIVAEVGVLPRAHGSALFTRGETQAMVVTTLGTG
EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH
EFPYTTRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEDKRFAVLS
DILGDEDHLGDMDFKVAGTEQGITSLQMDIKIEGITEEIMRVALGQAKEGRIHILGEMAK
ALTAARAELGEYAPRIESFKIPTDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
SDGEAMKAAIKWIKSIASEPEVGQIYDGTVVKVMEFGAFVNFFGSKDGLVHISQLAANRV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQTTGEDLEAKEKAAEGEKAPREAAGE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataagcattcagtcgagatcgactggggcggacgccctctcaagctcgaaacc
ggcaagatcgcccgtcaggccgacggcgccgtcatcgccacctatggtgagaccgtggtg
cttgccacggtcgtcgcggcgaaggcgccgcgcgaaggcgtcgacttcctgccgctgact
gttgactaccaggaaaagacctacgctgcggggcgcattcccggcggctatttcaagcgc
gagggacgtccgaccgagaaggagacgctggtctcccgcctgatcgaccgtccgatccgc
ccgctgttcgtcgacggttggcgcaacgagacccaggtgatcgtcaccgtgctctcgcac
gacatggaaaacgatcccgatatcgtggcgatggtcgcggcctccgccgcgctgacgctg
tccggcgtgccgttcaagggcccgatcggcgcggcgcgtgtcggctttgccaatgacgaa
ttcgtcctcaacccgacgctcgacgagatggtcgacacccagctcgatctcgtcgtcgcc
ggcaccgccgacgccgtgctgatggtggaatcggaagccaaggagctcaacgaagacgtg
atgctcggcgccgtgatgttcggtcaccgccacttccagccggtcatcaacgcgatcatc
gagctcgccgagaaggccgccaaggagccgcgcgaagtcaccgcgatcgacaattcggcg
atcgaaaaggaaatgctcggcctgatcgagcaggagctgcgcgccgcctacgcgatcccc
gtgaagcaggagcgttatgccgcggtcggcgtcgccaaggaaaaggtgatggcccactac
ttcccggagggccaggagccgaaatacgacaagctccgtatcgccggcgtgttcaaggag
ctcgaggccaagatcgttcgctggaacgtcctcgacaccggcaagcgcatcgacggccgc
gacgtcaagacggtgcgcaacatcgtcgccgaagtcggcgtgctgccgcgcgcccacggc
tcggcgctgttcacccgcggcgagacccaggcgatggtcgtgaccacactcggcaccggt
gaggacgagcagtacatcgacgcgctgtcggggacgtacaaggaaacattcctgctgcac
tacaacttcccgccctactcggtcggcgagaccggccgcctcggcggcaccaagcgccgc
gagatcggccacggcaagctcgcctggcgcgcgatccacccggtgctgccgccgcatcac
gagttcccctacacaacgcgcgtggtgtcggagatcaccgaatccaacggctcctcctcg
atggcttcggtctgcggcgcctcgctggcgctgatggatgccggcgtgccgctcaagcgg
ccgaccgcgggcatcgcgatgggcctgatcctcgaggacaagcgctttgcggttctttcg
gacatcctcggtgacgaggaccatctcggtgacatggacttcaaggtcgccggtaccgaa
cagggcatcacctcgctccagatggacatcaagatcgagggcatcaccgaagagatcatg
cgcgtcgcccttggccaggccaaggaaggccgcatccacatcctcggcgagatggccaag
gccctgaccgcggcccgcgccgagctcggcgaatacgcgccgcgcatcgagagcttcaag
atcccgaccgacaagatccgcgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaaggtcaacatcgaggacgacggcaccgtgaaggtcgcctcc
agcgacggcgaggcgatgaaggccgcgatcaagtggatcaagtcgatcgcgtccgagccg
gaagtcggccagatctatgacggcaccgtcgtcaaggtgatggagttcggcgccttcgtg
aacttcttcggctccaaggacggcctcgtccacatcagccagctcgcggccaaccgcgtg
cagaagacctccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgaccgcggcaagacccgcctgtcgatgaaggtagtcgaccagaccaccggcgaagac
ctcgaagccaaggagaaggccgccgagggcgagaaggctccgcgcgaagcggccggcgag
taa
DBGET
integrated database retrieval system
