Bradyrhizobium sp. C-145: LRP30_44265
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Entry
LRP30_44265 CDS
T09672
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
braz
Bradyrhizobium sp. C-145
Brite
KEGG Orthology (KO) [BR:
braz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
braz03400
]
LRP30_44265 (addB)
Enzymes [BR:
braz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LRP30_44265 (addB)
DNA repair and recombination proteins [BR:
braz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LRP30_44265 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UQR63634
UniProt:
A0AB38SE18
LinkDB
All DBs
Position
9411322..9414468
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AA seq
1048 aa
AA seq
DB search
MRVFSVPISVPFLRTVVAALLDGRLVDGFEARKEPARLADATLYLPTRRAMRVVREIFLD
EMKADAVVLPRIVALGDIDEDELAFADEGEQFSGATPLDIPPRLGELERRLTLAQLVAAW
AKGPVLAPLVVGGPASTLALAGDLARLIDDMVTRGVDWSALDGLVPDQLDRYWQHSLEFL
RIARIAWPSHLAEIKRIEPAARRDLLIAAEARRLTAHPSGPVIAAGSTGSMPATAKFLHA
VASLPHGAVVLPGLDTDLDDDAWRTIGGVRDALGKFAEHPASNHPQYAMHALLQRFGIKR
SDVEILQPPAEGGRDLLASESMRPSAKTEIWHDRLKQPDVAAKIAGGMKNLTVVEAPNPE
MEALAIAIAMREARHLDKSAALVTPDRALARRVMAALARWDLAFDDSGGDVLMETSAGVF
ARLAAEAATKGLEPPTLLAMLKHPLCRLGRAPSAWKAAIEGLELAVLRGTRPPAGTAGLL
REFNRFRDELAKLWRSEVSALHKAEPRARLKAEDLDRIQALIDALQKALAPIESLASSKP
YDFAELAHRHREIMIELSRDEQGIPLAFEEREGLALAGAFDDLLRGGTTSGLMVPLPDYP
DVFQTAFGDRAVRRRDRPGARLQIYGPLESRLMQADRIIIGGLIEGVWPPAPRIDPWLSR
PMRHELGLDLPERRIGLSAHDFAQLLGGDEVILTHSAKAGGAPAVASRFLHRLEAVAGDE
LWKAAVRAGEKYVQFAGALDQPDEVRPIKQPEPRPPRATRPLKMSVTAIEDWLRDPYTIY
AKHILRLDALDPVDMPLSAADRGSAIHDALGEFTETYAARLPDDPARVLRAIGEKHFAPL
MERPEARALWWPRFQRIARWFGEWETARRDAIEAITAETHGEISITLDTTRSFRLSARAD
RIERRKGGFYAILDYKTGQPPSDKQVRMGLSPQLTLEAAILREGGFPDIDAGASVSQLVY
VRLSGNNPAGEERILQLKVNKGDEPIPPDTAAADARAKLEALIRAFEDENQPYTSLNLPM
WANRYGIYDDLARIKEWSAAGGLGIEEW
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttttcagcgttcccatctcagttccgttcctacgcacggtcgtcgcggccctg
ctcgacggccggctggtcgatggcttcgaggcgcgtaaggagccggcgcggcttgccgat
gccacgctgtatctgccgacccggcgcgcgatgcgcgtggtgcgcgagatcttcctcgac
gagatgaaggcagacgcggtggtgctgccgcgcatcgtcgcgctcggtgacatcgacgag
gacgagctcgctttcgccgacgagggcgagcagttttcaggtgcaacacctctcgacatt
ccgccacggctgggtgagctcgaacggcggctgacgctggcgcagctcgtcgccgcttgg
gccaagggcccggtgctggcgccgctggtggttggcggtccagcttcgacactggcgctg
gccggcgacctcgcgcgcctgatcgacgacatggtgacgcgcggcgtcgactggagcgcg
ctcgacggtctggtaccggatcagctcgaccgctactggcagcactcgctcgaattcttg
cgcatcgcgcgcattgcctggcccagccatctcgccgagatcaaacggatcgagccggcg
gcgcggcgcgatctcctgatcgcggcggaagccaggcggctgaccgcgcatccgagcggg
ccggtgatcgcggccggctcaaccggctcgatgccggccaccgcaaaattcctccatgcg
gtcgcatcgctgccacatggcgccgtggtgctgccgggcctcgacaccgatctcgacgat
gacgcctggcgcaccatcggcggcgtgcgcgatgcgctcggcaaattcgcggagcatccg
gcctcgaaccatccgcaatatgccatgcacgcgctgttgcagcgttttggcatcaagcgc
agcgacgtcgagattctccagccgccggcagaaggcggccgcgatctgctcgcatccgaa
tcgatgcggccgtcggccaagacggaaatttggcatgaccggctgaagcagccggatgtc
gcggcaaagatcgccggcggcatgaagaacctgacggttgtcgaagcccccaaccctgaa
atggaggcgctcgctatcgcgatcgcgatgcgcgaggcgcggcatctcgacaaatcggcg
gcgctggtgacgcccgatcgcgcgctggcgcggcgggtgatggctgcgctggcgcgatgg
gacctcgccttcgacgattccggcggcgatgtgttgatggaaacatccgccggcgtcttt
gcccgcctggcggcagaggcggcgaccaagggcctggagccgccgacgcttttggcgatg
ctgaagcatccgctgtgccggctcggccgcgcgcccagtgcgtggaaggcagcgatcgag
ggcctcgaactcgcggtcttgcgcggcacgcgtccacccgcgggcacggccggcctcctg
cgcgaattcaaccgctttcgcgacgagctggcaaagctgtggcgcagcgaagtctccgcg
ctccataaggccgagccgcgcgcgcggctcaaggccgaggatctcgatcgaatccaggcg
ctgatcgatgccttgcaaaaagcattggcgccgatcgagagcctggcctcgtcaaaaccg
tatgacttcgccgagctcgcgcaccggcatcgcgagatcatgatcgagctgtcgcgcgac
gagcagggcattccgctcgccttcgaggagcgcgaaggcctcgccctcgccggcgccttc
gacgacctgctgcgcggcggaacgaccagcgggctgatggtgccgttgcctgactatccc
gacgtcttccagaccgcgttcggcgatcgcgcggtgcggcggcgggatagacccggcgcc
cggctgcaaatctacggcccgctggaatcgcgcctgatgcaggccgaccgtatcatcatt
ggcggcctgatcgagggcgtctggccgccggcgccgcgcatcgacccctggctcagccgg
ccgatgcggcacgagcttgggctcgatctgccggagcgccgcatcggcctttccgcacac
gacttcgcgcagctgctcggcggcgacgaggtgatcctcacccattcggcgaaggccggc
ggcgcgccggcggtggcctcgcgcttcctgcatcggttagaggcggtggcgggcgatgag
ctctggaaggcggcagttcgcgccggcgaaaaatatgtgcagtttgcgggcgcgctggac
cagcccgacgaggtcaggccgatcaagcagccggagccgcgaccgccgcgcgcgacgcgg
ccgctcaagatgtctgtcaccgcgatcgaggactggctgcgcgatccctacacgatctac
gcaaagcacattttgcggctggatgcgcttgatccggtcgacatgccgctctcggccgcc
gatcgcggctcggccatccatgatgcgctcggagagttcacggaaacctatgcggcacgc
ctgcccgacgatcccgcgcgcgtgctgcgcgcgatcggcgagaagcattttgcgccgctg
atggagcgccccgaggcgcgggcactgtggtggccgcgcttccagcgcatcgcgcgctgg
ttcggtgaatgggagacggcgcggcgcgatgcgatcgaggccatcacggcggagacccac
ggcgagatctcgatcacgctcgacaccacgcgtagcttccgcctctctgcgcgcgcggac
cgcatcgagcgccgcaagggaggcttctatgccatcctcgactacaaaaccgggcagccg
ccaagcgacaagcaggtccgcatgggcctgtcaccgcaactgacgctggaagccgcgatc
ctgcgcgaaggcggctttcccgacatcgacgccggtgcgtcggtcagccagctcgtctat
gtccgcctgagcggcaacaatccggccggggaagagcgcatcctccagctcaaggtaaac
aaaggtgacgagccaattccgccggacactgccgccgccgacgcaagagccaaattggag
gcgctgatccgcgccttcgaggacgagaaccagccgtacacctcgctgaacctgccgatg
tgggcgaaccgctacggcatctatgacgatcttgcccggatcaaggaatggtctgcggcc
ggtggattggggatcgaggaatggtga
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