Bradyrhizobium sp. C-145: LRP30_44415
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Entry
LRP30_44415 CDS
T09672
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
braz
Bradyrhizobium sp. C-145
Pathway
braz02020
Two-component system
braz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
braz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LRP30_44415 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LRP30_44415 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
braz03021
]
LRP30_44415 (rpoN)
Transcription machinery [BR:
braz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LRP30_44415 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
UQR63661
LinkDB
All DBs
Position
complement(9442896..9444530)
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AA seq
544 aa
AA seq
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MALTQRLEFRQSQSLVMTPQLMQAIKLLQLSNLDLTTFVEEELERNPLLERANDEAGGEA
SADAGQYGEEARGQDDGNGDSFGDDGFGGSAEAFEPGQEEWMSKDLGTRAEIEQTLDTGL
DNVFSEEPAEAAARNAQDAAPTTYTEWGGGASGDEDYNLEAFVAAETTLSDHLAEQLSVA
FTAPAQRMIGQYLIDLVDEAGYLPPDLGQAAERLGASQQDVEDVLAVLQKFDPPGVCARN
LSECLAIQLRELDRYDPAMQALVEHLDLLAKRDIASLRKLCGVDDEDIADMIGEIRRLNP
KPGMKFGSARLQTMVPDVYVRPGPDGGWHVELNSDTLPRVLVNQTYYSELSKKIGKDGDK
SYFTDALQNATWLVRALDQRARTILKVATEIVRQQDGFFTHGVAHLRPLNLKAVADAIQM
HESTVSRVTANKYMATNRGTFELKYFFTASIASADGGEAHSAEAVRHHIKQLIDAEEPTA
ILSDDTIVERLRASGIDIARRTVAKYREAMRIPSSVQRRRDKQSALGNVLSTAMSDRSRN
TEPA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcacgcagagattagagttccggcaatcgcagtcgctggtcatgacgccgcag
ctgatgcaggcgatcaagctgctgcaattgtccaatctcgatctcacgaccttcgtggag
gaggaactcgagcgtaacccgctgctggagcgggccaatgacgaagccggcggcgaagct
tccgccgacgccggccagtacggcgaggaggcccgcggccaagacgatggtaacggcgac
agttttggcgacgacggctttggtggcagcgcggaggccttcgagcccggccaggaagaa
tggatgagcaaggatctcggcacccgcgccgagatcgagcagaccctggacaccggcctc
gacaacgtcttctccgaggagccggccgaggcggctgcgcgcaacgcccaggacgccgcg
ccgaccacctataccgaatggggtggcggcgcctcgggtgacgaagactacaatctcgaa
gcttttgtcgcggccgagacgacgttgtcggatcatctcgccgagcaactctcggtcgcc
ttcaccgcgccggcgcagcgcatgatcggccagtacctgatcgacctcgtcgatgaggcc
ggctacctgccgccggatctcggccaggccgccgagcgtctcggcgcatcgcaacaggat
gtcgaggacgtccttgccgtgctgcaaaaattcgatccgcccggcgtctgtgcgcgcaat
ttgagcgaatgcctggcgatccagctgcgcgagctcgaccgctacgatccggccatgcag
gcgctggtcgagcatctcgatctcctcgccaagcgcgacatcgcgtccttgcgcaagctt
tgcggcgtcgacgacgaggacatcgccgacatgatcggcgagatccgccgcctcaatccc
aagcccggtatgaagttcggctcggcgcggctccagaccatggtgcccgacgtctatgtc
cgcccgggtcccgacggcggctggcacgtcgagctcaacagcgacaccctgccgcgcgtg
ctggtcaaccagacctactattccgagctgtcgaagaagatcggcaaggacggcgacaag
tcctacttcaccgatgcgcttcagaacgcgacctggctggtgcgcgcgctcgaccagcgc
gcccgcaccatcctgaaagttgcaaccgagatcgtgcgccagcaggacggcttcttcacc
catggcgtggcacacttgcggccgctcaatctcaaggccgtcgccgatgccatccagatg
catgaatccacagtgtcgcgcgtcaccgccaacaaatacatggcgaccaatcgcggcacg
ttcgagctgaaatatttcttcacggcctcgatcgcctcggccgacggcggcgaggcgcat
tccgccgaagccgttcgccaccacatcaagcagctgatcgatgcggaagagcccacggcg
atcctgtcggatgacaccatcgtggaacgcttgcgcgcctcgggcattgatattgcccgc
cgcacggtcgcgaagtaccgcgaagccatgcgtataccctcctcggtgcaacgccgccgc
gacaagcagagtgcccttggtaacgtcctctccaccgcaatgtccgatcgttcccgcaac
accgagccggcctga
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