Brenneria rubrifaciens: EH207_02675
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Entry
EH207_02675 CDS
T05976
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
brb
Brenneria rubrifaciens
Pathway
brb03410
Base excision repair
brb03430
Mismatch repair
brb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EH207_02675 (recJ)
03430 Mismatch repair
EH207_02675 (recJ)
03440 Homologous recombination
EH207_02675 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brb03400
]
EH207_02675 (recJ)
DNA repair and recombination proteins [BR:
brb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EH207_02675 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EH207_02675 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EH207_02675 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QCR07545
UniProt:
A0A4P8QTP8
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All DBs
Position
549069..550802
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AA seq
577 aa
AA seq
DB search
MERITQLRRRPRAEDIDLPATVPPLLRRLYAQRGIKGAQELERGLRGLLDYRLLSGIGRA
VDFLHRALSDQRRIVIVGDFDADGATSTALTVLALRSMGGVDVKYLVPNRFEDGYGLSPE
VVAQAAALGADVIVTVDNGISSHAGVDDAHRRGIAVLVTDHHLPGETLPAADAMINPSLR
DCAFPSKSLAGVGVAFYLMMALRAHLRDIGWFTAKALAEPNLAELLDLVALGTVADVVPL
DANNRILVAQGLSRIRAGKCRPGIKALLEVANREGGQLVASDLGFALGPRLNAAGRLDDM
SVGVALLLCDDIAQARMLASDLDALNQTRRGIEQGMQVEALRLCETLERSRDQLPYGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGMLKGSGRSIAGLHLRDALERLDTLYP
GMMLKFGGHAMAAGLTLMEEQFDGFRQRFGELVGEWLDASQLEGVIWSDGELAQPELCLS
TAEMLRDAGPWGQSFPEPTFDGRFRILQQKLVGERHLKVMVEPVNGGPLLDGIAFNVDTL
LWPDSSVREAELAYKLDVNEFRGKRSVQLLIQHLWPL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtggagcggataacacaactccgccggcgtccgcgggcggaggatattgatttacccgcg
acagtgccgcccttgctgcgtcgcttgtatgcgcaacgcggtattaaaggcgcacaggag
ttggagcgcggtttgcgcggcctgctggattaccgcttgctgagcggtatcgggcgggcc
gtcgattttctgcaccgggcgctgtcggaccagcgccgcatcgtaattgtcggcgacttt
gacgccgacggcgcaaccagtaccgcgctgacggtgctggcgctgcgtagcatgggcggc
gttgacgtaaagtatctggtgccgaaccgctttgaggatggctacgggctaagcccggaa
gtcgtcgcgcaggcggcggcgctgggggctgacgttattgtcacggtggataacggcatt
tcttcccacgccggcgtggatgacgcgcatcggcgcggcattgccgtgctggtgactgac
caccatttgccgggtgaaaccttgcccgccgccgatgccatgattaacccaagtctgcgc
gactgcgcgtttccgtcgaaatcgctggcgggcgtcggggtcgccttctatttgatgatg
gctttacgggcgcatctgcgtgacatcggctggtttaccgcgaaagcgctggcggagccg
aatctggctgaattgctggatctggtggcgttggggacggtagcggatgtggtgccgctg
gacgccaataatcgtattcttgtggcgcaggggctgagccgtattcgcgccggaaaatgc
cgtccgggcatcaaagcgctgctggaggtggcgaaccgtgagggcggacaactggtcgcc
agcgatcttggtttcgcgcttgggccgcggttgaacgccgccgggcggctggacgatatg
tcggtcggcgtggcgctgctgctctgcgatgatattgctcaggcgcgtatgctggctagc
gatctggacgcgcttaaccagacgcgccgtggaatagagcaagggatgcaagtggaggcg
ctgcgcctgtgcgaaacgctggagcgcagccgcgaccaactgccatacggtctggcgatg
tatcaccctgaatggcatcaaggggtggttggcattctggcctcacgcatcaaagagcgg
tttcaccgtccggtcattgcctttgctcctgcgggcgacggcatgctgaaaggatcgggg
cgttccatcgccggcctgcatctgcgcgatgcgctggagcgtctggatacgttgtatccg
gggatgatgctgaaattcggcggtcacgctatggcggcggggttaacactgatggaagaa
cagtttgatggtttccgtcagcgctttggcgaactggtcggcgaatggctggatgcctcg
caacttgagggggttatctggtcggatggcgaactggcgcagccggagttgtgtttatcc
acggcggagatgctgcgtgacgccggaccctgggggcaatcgtttcctgaaccgacgttc
gacggccgttttcgtatcctgcaacagaaactggtcggcgagcggcatctgaaagtgatg
gtggagccggtaaacggcggcccgctgctggatggtattgcgtttaatgtggatacgctg
ttgtggccggacagcagcgtgcgcgaggcggagctggcgtataagctggatgtgaatgag
tttcgcggtaagcgctcggtgcaactgctgattcagcatttatggccgctgtaa
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