Brenneria rubrifaciens: EH207_03600
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Entry
EH207_03600 CDS
T05976
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
brb
Brenneria rubrifaciens
Pathway
brb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EH207_03600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brb03400
]
EH207_03600
Enzymes [BR:
brb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EH207_03600
DNA repair and recombination proteins [BR:
brb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EH207_03600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF6026
Motif
Other DBs
NCBI-ProteinID:
QCR07700
UniProt:
A0A4P8QR13
LinkDB
All DBs
Position
766641..770033
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AA seq
1130 aa
AA seq
DB search
MFTVYHSNQLDILKRLMVELIKRQPLQDPFQQEVVLVQSPGMAQWLQIELAGHFGIAANI
HFPLPGVFLWEMCRHVLPDIPKESAFSKEAMTWKLMHLLPEQLEQPDFAPLRHYLRDDED
QRKRYQLAGRIADLFDQYLIYRPQWIAQWQAGNTVDGLGVNQSWQAALWRALVDYTRELQ
QPEWHHAILYQRFIQTLEQAKTCPAGLPPRVFICGISALPPIYLQALRALARHIDVHLLF
TNPCRHYWSDIQDYKFLARLKTRHRRLHRWDSAQPENCRPLFRDPQQADGLFNVEGEQRL
NNPLLASWGKLGRDHLYLLAELDDVQEVDAFVELDADNLLQTLQHDILELEDRTVVAVSK
ASLETSVKKRPLDRHDRSIEIHACHSPQREVEVLHDRLLAMMADDPELTPRDIIVMMADI
DGYTPFIQAVFGNAPVERHLPFAISDRRARHAHPALQAVISLLDLPNSRFTAEQVLTLLE
VPALAARFGIQEEGLRRLRLWVAESGIRWGLDDDNVRELALPPTGQHTWRFGLTRMLLGY
AMDSRAGEWQGVLPYDESSGLVAELAGQLAELLMQLNVWRQRLRQPRSLADWLPLCRQLL
ETFFDADSETEAVLALIEKQWQQVLGMGMAARYPQAVPVSLLRDELSHRLDQERLSQRFL
AGTINFCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMGKNTKRGDRSRRDDDRYL
FLEAMLSAQSKLYISYIGRSIQDNTRRYPSVLVSELTEYIAQSHYLPGDEALDIDDSAER
VARHLRYEHSRMPFDAKNFLAEPAPQSFASEWLAAARRQGQSQPDFDSELPQVRYTDISL
DALKRFYRHPIRAFFQLRLGVSFMLQNDELLDEEPFTVDNLSRYQLNTELLNTLIAEEDP
DRLYRRVRAAGGLPFGAFGELYWQSQQEEMTDLAARIREEMTPDAAESLEIDIRIDDRHI
RGWLAQVLPDGLLRWRPGKLSMTDGMTLWLEHLVYCLSGGQGESRMYGREKTAWRFAPVS
AQQAQAFLQQILDGYQQGMNQPLLLLNKSGSAWLTQCYDRESDDIQWDDETQRKARAKLL
LAWQGNKGQPGEGEDYYLQRMVRELDERRMNEVIEAAQIWLLPPIRSNLA
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtttacggtttatcattccaaccagttggatattttgaaaaggctgatggtcgagctg
attaaacgtcagccgctccaagacccttttcaacaggaagtggttctggtgcaaagcccc
ggaatggctcagtggttgcagattgaactggccgggcattttggcatcgccgccaacatc
cattttccactgcccggcgtttttttgtgggagatgtgccgtcacgttttgcccgatata
ccgaaagagagcgctttcagcaaggaggcgatgacctggaaattgatgcatttgcttccc
gaacagttggaacagcctgattttgcccccttgcgccattacctgcgggatgacgaagat
caacgtaagcgataccagcttgccggacgtattgccgacctttttgatcaatatctgatt
taccgtccgcagtggatcgcgcaatggcaagcgggtaatacggtggacgggctgggggta
aaccagtcctggcaggcggctttatggcgagcattggttgattacacccgggaactgcaa
caacccgaatggcaccatgcgattttgtatcaacgttttattcaaacgctggagcaggca
aaaacctgcccggccgggctgccgccgcgggttttcatctgtggtatttccgctttgccg
ccgatctatttgcaggcgttgcgcgcgctggcccgtcacattgatgtgcatctgttgttt
accaacccttgccggcactactggagcgacattcaggattacaaattcctggccaggctg
aaaacccgtcatcgccgattgcatcgctgggacagcgcccagcctgaaaactgccggccg
ctatttcgcgatccacaacaggcggatggattgttcaacgttgaaggagaacagcggctc
aataatccattgctggcctcctggggtaagctgggccgcgatcatttgtatctgctggcc
gaacttgatgatgtgcaggaagtggatgcgtttgtggaactggatgccgataacctgctg
caaaccctccagcacgatattctggaactggaagatcgcacggtggtggccgttagcaag
gcgtcgctggaaaccagcgtgaagaaacgcccgctggatcgccacgatcgctctattgag
atccacgcctgccacagcccgcagcgtgaagtcgaagtgttgcacgatcggctattggct
atgatggccgatgacccggaactgacgccgcgcgatattatcgtcatgatggcggacatc
gacggctatacgccgtttatccaggccgtatttggcaatgccccggtggaacgccatctg
ccttttgcgatctccgatcggcgggcgcggcacgctcacccggcgttacaggcggtcatc
agcctgttggatttacccaatagccgttttaccgccgagcaggttttgacgttgctggaa
gttcccgcgttggcggcgcgtttcggtattcaggaagaagggttgcgccgtttgcgttta
tgggtggcggagtcgggtattcgctggggattggatgacgataacgttcgtgagctggcg
ctcccccctacgggacagcacacctggcgtttcgggttgacgagaatgctgctgggttac
gctatggacagtcgggccggggagtggcaaggggtattgccttacgacgaatccagcggt
ctggtggcggaactcgccggacaactggctgaattgctgatgcagcttaacgtgtggcgt
caacgtctgcggcaaccccgctcgttggcggactggctgcctctgtgccggcagttgttg
gaaaccttttttgatgccgacagcgagacggaagcggtgctggccctgatagagaaacag
tggcagcaggtgcttggcatgggaatggcagcgcgctatccgcaggccgtaccggtttcg
ttgttgcgtgatgaattatcccaccggctcgatcaagagcggctcagccagcgttttctg
gctggaaccatcaatttctgtacgctgatgcccatgcgttcgattcccttcaaggtggta
tgcctgctggggatgaatgacggtgtttacccgcggacgctgccgcctcttgggttcgat
ctgatggggaaaaacaccaaacgaggcgatcgcagccggcgtgatgacgatcggtacctg
tttctggaagcgatgctgtccgcgcaaagcaaactgtatatcagctatattggccgttcg
atacaggataatacccgccgctatccttccgtgctggtcagtgagctgacggaatacatt
gcgcaaagccactatctgccgggggatgaagcgcttgatattgatgacagcgcggagcgc
gtggcgcgccatctgcgttacgaacatagtcgaatgccatttgatgcaaaaaacttcctg
gcggagccggcgccgcagagctttgcgtcggaatggctggcggccgccagacggcaggga
cagtcccagcccgattttgatagcgaacttcctcaggtgcgctataccgatatcagccta
gacgcgttaaaacgcttttaccggcatccgatccgggcttttttccagcttcggttgggg
gtgagtttcatgctgcaaaacgatgaactgcttgatgaggaacccttcaccgtcgataac
ctgagtcgctatcagttgaataccgaactgcttaacacgttgatcgccgaggaagatcct
gatcggttgtatcggcgtgtccgtgccgcgggaggcttgccctttggcgcctttggcgaa
ctttactggcagtcgcagcaggaggaaatgacggatctggccgcgcgcatacgtgaggaa
atgacgccggacgcagcggaaagtctggaaatcgatatccgaatcgatgataggcatatc
cgtggctggctggctcaggtgctgcccgacggtctgctgcgatggcgtcccggaaaactc
tcgatgacggacggcatgacgctgtggctggagcatctggtctattgcctttcgggaggg
cagggcgaaagccggatgtacgggcgtgaaaaaacggcatggcgattcgcgcccgtgtcc
gcgcagcaggcgcaggcgttcctgcaacagatactggacggctatcagcaaggaatgaac
cagccattgctgctgctcaacaaatcgggcagcgcttggttaacgcaatgctacgatcgc
gaaagtgatgatattcaatgggatgatgaaacacagcgcaaagcgcgcgccaaactgcta
ttagcctggcagggcaataaggggcagccgggggagggggaggattactatctgcaacga
atggtgcgcgaattggatgaaagacgaatgaatgaggtgattgaggcggcgcaaatctgg
ttgctgccgccgattcgttctaatctggcttga
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