Brenneria rubrifaciens: EH207_03610
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Entry
EH207_03610 CDS
T05976
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
brb
Brenneria rubrifaciens
Pathway
brb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EH207_03610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brb03400
]
EH207_03610
Enzymes [BR:
brb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EH207_03610
DNA repair and recombination proteins [BR:
brb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EH207_03610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
AAA_11
AAA_30
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QCR07702
UniProt:
A0A4P8QKU8
LinkDB
All DBs
Position
773004..776552
Genome browser
AA seq
1182 aa
AA seq
DB search
MKQTTPQSLNVMTLPLQGERLIEASAGTGKTYTLAALYLRLLLGLGKQSAYPRPLLVEEI
LVVTFTEAATEELRERIREKIHGLRIACIRGESNDPLLSELLAEIPDRQDAAEVLLSAER
QMDEAAIHTIHGFCQRILSTHAFESGVLFEQALIEDEHPLRRQACADFWRRNCYALPMDV
ARVIGLAWSGPESLLSDLMPYLQGESPVFRHPPEEGETLLSRHQKVIAVIDAFKQQWLAS
AAELEGVIGASGVDKRSYSSKHLPNWLQKVTLWAEQPTKDYQLPKELERFSQRILVEKTR
KGDAPEHRVFEAVDCLLGESLSLRDVVIVRALSEIRQSVREEKRQRAELGFDDLLSRLDE
ALQQPGGDRLAGSVRERYPVAMIDEFQDTDPQQYRIFRTLYGGQPQCGLLLIGDPKQAIY
AFRGADIFTYMRARSEVSAHYTLDTNWRSSHQMVRGVNRLFQRLDCPFIFKEIPFLAVEP
AESKRDLLFEIAGEPQPALQFWLTGEEALGVGDYQQRMARQCAGQIRDWLAASQRGQAWL
NTGKGRRLVQASDMSVLVRSRHEAALVREALSRLAIPSVYLSNRDSVFTTPEARDVLWIL
QAVLAPEQERTLRSAMATSLVGLDASALDTLSRSEDDWDTLVEEFAGYRALWRQRGVLPM
LRALMSHRQLAENLLASGDGERRLTDVLHIGELLQDASSALDSEHALVRWLSQQIIQPNP
QAENQQLRLESDRHLVQIVTIHKSKGLEYPLVWLPFVSNFRVQDQGVYHDRSSYQALLDL
HNSEESQALAEEERLAEDLRLLYVALTRSIYHCSVGVAPLQRSGRKDQSSDMHQSALGYL
LQRGKEADVATLVTELRGMTGDGVAVTLVRPDDERPWQPDEPARRELQARHSERVWRDGW
RVTSYSGLQQHGSSAVQDLIPRLDIEAMGERLDEQETQFTPHTFPRGASPGTFLHSLFET
LDFTQPVNGAWLAEQLLLQGLDAVWHPVLRTWMEAILNTPLNDDGIRLSALDTQHKRAEL
QFYLPIEAPMQAMRLDELAKRYDPLSAGCPPLSFQQVQGMLKGFIDLVFRWKGRYYLLDY
KSNWLGADAGAYTQPAMAQAMAEHRYDLQYQLYSLALHRYLRHRIADYDYERHFGGVFYL
FLRGFDDRYPANGVFYCRPQAAFIAGLDRLFRGNQTEEADTP
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaactacgccgcaatcattaaacgtcatgacgttgccgctccagggggagcgg
ctgattgaggcatcggccgggacagggaaaacctatacgttggcggcgctgtatctgcgt
ttgctgctggggttgggaaagcagtccgcttatccgcgtccattactggttgaagaaatt
ctggttgtcacctttaccgaagcggccactgaagaattgcgcgagcggatacgggagaaa
atccacggactgcgtattgcctgcatccgtggggaaagcaacgatccgctgttgagcgag
ctattggctgaaatcccggatcgtcaggatgccgccgaggtgctgttgtccgctgaacgg
cagatggatgaggcggctatccataccattcacggtttttgccaacgcatattgagcact
cacgcgtttgagtctggcgtcctgttcgagcaggcgctgatagaggatgagcatccttta
cggcgtcaagcctgcgcggatttctggcgccgcaactgttatgcgctgccaatggatgtg
gcgcgggttatcggcctggcgtggagcgggccggagagtttgctctctgatttgatgcct
tacctgcaaggtgagagtccggtttttcgtcatcctccagaggagggggaaacactactg
agtcggcaccagaaagttattgctgtaatcgacgctttcaagcagcaatggctggcgtcg
gcggcggaactggaaggggtgatcggcgcgtccggtgtggataagcgcagctatagcagt
aaacacctgcccaactggttacagaaagtcacgctgtgggcggaacagccgacaaaggac
tatcaattgccaaaagagctggaaaggtttagccaacggatcctggtggagaagaccagg
aaaggcgacgcgcctgaacaccgtgtgtttgaagcggttgattgcttgctgggcgaatcg
ctctctttgcgtgatgtcgtcattgtgcgggcgctaagcgaaattcgtcagtctgtgcgt
gaggaaaaacggcagcgtgcggaattggggtttgatgatttactcagtcggctggatgag
gcgttgcaacagccgggtggcgaccggttggccggttcggtgcgggaacgttatccggtt
gcgatgattgacgaatttcaggataccgatccgcagcaataccgaattttccgcaccttg
tatggcgggcaaccgcagtgcggcctgctgctgattggcgatcccaaacaggcgatctat
gcattccgcggcgcggatatttttacttatatgcgggcccgatcagaagtgagcgcacac
tacacgctggataccaactggcggtcatcgcatcaaatggttcggggcgtgaaccgtcta
tttcagcgccttgactgtccgtttatttttaaagagatcccctttctggcggttgaaccc
gccgaatcgaagcgcgatctgctcttcgagatcgccggagaacctcaacccgcgctacag
ttttggctgaccggcgaggaagcccttggcgttggggattatcagcagcgcatggcacgg
caatgcgcagggcagattcgtgactggctggccgccagccagcgcgggcaggcctggctg
aatacaggtaaagggcgccgtctggttcaggcgtctgatatgagcgttctggtgcgcagc
cgtcacgaagccgctttggtgcgagaggcgttaagcaggcttgccattccgtcggtgtat
ctgtccaaccgcgacagcgttttcaccacgccggaagcgcgggatgtcctgtggatcttg
caggcggtgctggcccctgaacaagagagaacattacgcagcgcgatggcgacatcgcta
gtggggttggatgcgtcggcgctggataccctgagccgtagtgaagacgactgggatacg
ctggtcgaggaatttgccggctaccgtgcgctttggcggcagcgcggcgtgctgccaatg
ctgcgcgcgctgatgagccaccgccaacttgcggagaacctgcttgccagcggtgacggc
gaacggcggctgaccgatgtactgcatatcggcgaattattgcaggatgcttcatcggcg
ctggatagcgaacatgcattggttcgctggctctcacagcagattatccagcccaatcca
caggcggagaaccaacaattgcgtctggagagcgatcgtcatctggtgcagatcgtgaca
atccataaatcgaaagggcttgagtatccgctggtctggctgccttttgtcagcaatttc
cgggttcaagatcagggcgtttatcatgacagaagcagttatcaggctttgcttgatctg
cataacagcgaagaaagccaggcgctggcggaagaagaacggctggccgaggatttgcgc
ctgctgtatgtggcgctgacccgttcaatctaccattgcagcgttggcgttgcgccgctg
caacgctcaggcaggaaagatcaaagcagcgacatgcaccaaagtgccctaggctatttg
ctccagcggggcaaagaggcggatgtggcaacgctggtgaccgaactcaggggaatgacc
ggcgacggggtggcggtaaccctggtacgacccgacgatgaacggccctggcaaccggac
gaaccggctcggcgggaattgcaggcccgtcacagtgagcgggtatggcgcgatggttgg
cgagtgaccagctattccggtttgcagcagcacggctcttccgcggtgcaggacttgata
ccccgcctggatattgaggcgatgggggaacggctcgacgagcaggaaacgcaatttacg
ccccatacgtttccgcggggggcgagtccggggacatttttacacagcctgtttgagacg
ctggattttactcagccagtgaatggcgcatggctggctgaacaactgttgttgcagggt
ctggatgcggtctggcatccggtgctgcgaacgtggatggaagcaatcctgaatacgccg
ctcaacgatgacggtattaggctatcggcgctggacacgcagcataaacgtgcggagttg
cagttctatttgccgattgaggcgccgatgcaggccatgcggcttgatgaactggcgaaa
cgctatgacccgttatctgccgggtgtccgccgctatcatttcagcaggtacagggcatg
ctgaaagggtttatagatctggtgttccgctggaaaggacgctattacctgctggactac
aaatctaattggctgggcgcggatgccggcgcttacacgcagccagccatggcgcaggca
atggccgagcatcgctatgacctgcaatatcagctttatagtctggcgctacaccgttat
ttgcgccaccgcatcgccgactatgactatgaacggcattttggcggcgtgttttatctg
tttttacgtggattcgacgatcgttatcccgctaacggggtgttttattgtcggccgcag
gccgcgtttattgccggattggatcgtttatttcggggaaatcagacagaagaggccgat
acgccatga
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