Brenneria rubrifaciens: EH207_03615
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Entry
EH207_03615 CDS
T05976
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
brb
Brenneria rubrifaciens
Pathway
brb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EH207_03615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brb03400
]
EH207_03615
Enzymes [BR:
brb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EH207_03615
DNA repair and recombination proteins [BR:
brb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EH207_03615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Viral_helicase1
Helicase_RecD
AAA_11
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
nSTAND3
PhoH
AAA_28
Herpes_Helicase
DEAD
T2SSE
Zeta_toxin
CbiA
TrwB_AAD_bind
DUF87
SRP54
MukB
AAA
UvrD_C
NTPase_1
ATPase
AAA_24
DO-GTPase1
Motif
Other DBs
NCBI-ProteinID:
QCR10267
UniProt:
A0A4P8QST9
LinkDB
All DBs
Position
776558..778417
Genome browser
AA seq
619 aa
AA seq
DB search
MIGLLETALQRRLLRPLDIQFARMLADDRHPHLLLAAACLSAQSGAGNVCLPLERLRPQG
LFDGRDHELAQQIGALLGQPETADWQRHLSSSEAVGDGRQPTPLVLQQSRLYLQRSWQNE
GRVAAFIAGKHQELPVNEPQIRAVLDSLFPAAGKDADWQKIAAAVALTRRIAVISGGPGT
GKTTTVAKLLAALIQLNRGGNALRIQLAAPTGKAAARLTESLGTALNSFALNEAHRDLFP
QEAATLHRLLGAVPDSQRLRHHQGNPLHLDVLVVDEASMVDLPMMANLIAALPEQARLIL
LGDRDQLASVEAGAVLGDICRFAEAGYSQSRAQQLQRLTGCQLDAGPASQVTVGDTICLL
RRSYRFDQHSGIGQLALAVNNGDDRRVLAVLNHGFTDIACRPLTDTQDYPRILEQGVEGY
RDYLQRIAAGESPEAVLLAFQRYRQLCALREGPFGVAGLNQRIEQALHKAGLISRNRNPL
NPWYIGRPVMIERNDAVLGLFNGDIGITLLNEKGELRVYFQLPDGRLKAVSPSRLPPHET
AYAMTVHKSQGSEFEHTALVLPNHFLPVLTRELVYTAVTRARKRLSLYADMKILCRAVNT
PTQRHSGLVERITALMVEE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgattggtttactcgaaacggcgttgcagcgtcggctgctgcggccgctggacatccag
ttcgccagaatgctggcggatgatcgacatcctcatttattgctggccgccgcctgtctg
agtgctcaatcaggggcgggcaacgtgtgtttaccgttggagagattacggccgcaaggg
ttatttgatggccgcgaccatgaactggctcagcagataggggcattgcttgggcaaccg
gagactgccgattggcagcggcatttatcgtcgtcagaagcggtcggcgacggtcgccag
ccgacgccgctggtattgcagcaaagcaggctgtacctgcaacgaagctggcaaaatgaa
gggcgtgtagccgcgtttattgccggtaagcatcaggaactgcccgttaatgaaccgcag
attcgcgccgtgctggatagtctttttcctgcggcgggcaaggatgctgactggcagaaa
atcgccgcggcggtggcgttgacccggcgtatcgccgttatttccggcgggccgggtacg
ggtaaaaccacgacggttgccaaactgctggccgcgttgattcagttaaaccgcggcggg
aatgcgttacggattcaactggcggctccgacgggtaaagcggccgcccgtttgaccgaa
tcgctggggacggcgttgaacagctttgcattgaacgaggcgcaccgcgacctcttccca
caggaagcggcgacgctgcaccgtttattgggtgcggtgccggacagtcagcgtctgcgt
catcatcagggcaatccgctgcatctggatgtcctggtcgtggatgaagcctcgatggtc
gatctgccgatgatggctaatctgatcgccgcactgcccgaacaggcgagacttattctg
ctgggcgatcgcgatcagcttgcttcggtagaggccggggcggtgctgggcgatatctgt
cgtttcgccgaagcgggatatagccagagcagggcgcagcagttacagcggctgacgggc
tgccagttggatgctggcccggcgagtcaggttaccgttggcgacactatctgtctgctg
cgcagaagctatcgtttcgaccagcactcaggtatcgggcagttggcgctggcggtgaat
aacggtgacgatcggcgcgtgctggcggtattgaaccacggctttacggatattgcctgt
cggccgctgacagatacgcaggattacccgcgtattctggaacagggcgtggaggggtat
cgtgactatttacagcgtatcgcggcgggtgagagtcctgaagcggtgctgctggcgttt
cagcgttaccgacagttgtgcgcgttgcgcgaagggccgttcggcgtcgcggggctgaat
cagcgaattgaacaggcgctgcataaagccgggcttatcagccgaaaccgcaacccgctt
aacccttggtatattggtcgtccggtgatgatcgagcgtaatgacgcggtgctggggctg
tttaatggtgatatcggtatcacgctgctgaatgaaaagggcgaactacgggtctatttc
cagttgcctgacggcaggctcaaggcggtgtcgcccagccgtttaccgcctcatgaaacg
gcctatgcgatgacggtacataaatcgcaagggtcggagttcgagcatacggcgctggtg
ttgccaaatcactttttgccggtgttaacgcgtgaactggtttataccgccgttacccgc
gcccgtaagcgtctgtcgctgtacgcggatatgaaaatcctgtgccgggcggtgaacacg
ccgacccaacggcatagcggactggttgagcgaattaccgcattaatggtggaggagtaa
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