Brenneria rubrifaciens: EH207_03820
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Entry
EH207_03820 CDS
T05976
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
brb
Brenneria rubrifaciens
Pathway
brb03030
DNA replication
brb03430
Mismatch repair
brb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EH207_03820
03430 Mismatch repair
EH207_03820
03440 Homologous recombination
EH207_03820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brb03032
]
EH207_03820
03400 DNA repair and recombination proteins [BR:
brb03400
]
EH207_03820
Enzymes [BR:
brb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EH207_03820
DNA replication proteins [BR:
brb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EH207_03820
DNA repair and recombination proteins [BR:
brb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EH207_03820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QCR07740
UniProt:
A0A4P8QR41
LinkDB
All DBs
Position
818407..821889
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKVGPLVKKAAALGMPALAITDFTNLCGLVKFYGGAHGA
GIKPIIGADVFVANGDLGDELAHLTLLAMDNEGYQNLTLLISRAYQRGYGAAGPTLDRDW
LIEHQHGLILLSGGRHGDVGRFMLRGNQTQAEHCLAFYQQHFPDRYYLELIRTGRPDEES
YLHAAVELATKHGLPVVATNDVRFISEDDFDAHEIRVAIHDGYTLDDPKRPRNYSAQQYM
RTEDEMCELFADIPEALINSVEIAKRCNVTIRLGEYFLPKFPTGDMSTEDYLVKRSKEGL
EERLEFLFPDPEIRAQKRPGYDERLDIELGVINQMGFPGYFLIVMEFIQWSKDNNVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDAEGNHPVTQ
FDKSDVEYAGLVKFDFLGLRTLTIIDWALEMINARRAKQGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIEWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKNPVEM
AKQRGGFEEGAKSRGIDGELAVKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQDGYFKELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQVDMFGVLADAPEQVEQSYSTVPPWPEQVVLDGERETLGLY
LTGHPITQYLKEIERYASGLRLKDMHPTERGKMTTAVGLVLAARVMVTKRGNRIGVCTLD
DRSGRLEIMLFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMTVRELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDARARLRFGAAWRITPTD
TLLNELRALVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccacgttttgttcacctacgtgttcacagtgactattccatgatcgatggg
ctggctaaagtcgggccgctggtaaaaaaagcggcggcgctggggatgccggctctggcg
attaccgatttcaccaacctgtgcgggctggtgaaattttatggtggcgcgcacggggcg
ggtattaaacccattatcggcgccgatgtgttcgtcgcgaatggagatctgggcgatgaa
ctggcgcatctcacgctactggcgatggacaatgagggataccagaatttaactctgctg
atttcacgcgcttatcaacggggctatggcgctgccggtccaaccctcgatcgcgactgg
cttattgaacatcagcacggtctgattctgttgtcgggcggtcgtcacggcgatgtcggc
aggtttatgttgcgtggcaatcagacgcaggccgagcactgtctggcgttttatcagcaa
cacttccccgatcgttattatctggagctgatccgcacaggtcggcccgacgaagaaagc
tatctgcatgcggcggtcgaactggcgacgaagcacggtcttccggtggtcgccaccaac
gatgtgcgtttcatcagtgaagatgattttgatgcgcacgaaatccgggtcgccatccac
gacggttatacgctcgacgatcctaaacgtccccgcaactacagcgcgcagcaatatatg
cgcactgaagatgaaatgtgcgagctatttgccgacatccccgaagcgctgatcaacagc
gtcgaaattgccaaacgttgtaacgtgactatccgcttgggcgaatacttcctgcccaaa
ttcccgaccggggatatgagcacggaagactatctggttaaacgttcaaaagaggggttg
gaggagcgtctagaatttctgtttcccgacccggaaattcgggcgcaaaaacgtcctgga
tatgatgagcgtctggacattgaactcggtgttatcaaccagatggggttccccggttac
ttcctgatcgtgatggagtttatccagtggtccaaagacaacaacgttccagtggggccg
ggacggggttctggcgcgggatcgctggtggcctatgcgctgaaaattaccgacctggac
ccgctggagttcgacctgctgtttgaacgttttcttaacccggaacgcgtgtccatgcct
gactttgacgtcgatttctgtatggaaaaacgcgatttggtgattgagcacgttgcggaa
atgtatggtcgtgacgcggtttcacagattattacctttggtacgatggcggcgaaagcg
gttattcgcgacgtgggccgcgtactgggccatccctatggttttgtcgatcgtatttcc
aagctggtgccgcccgatccgggcatgacgttggaaaaagccttcgccgccgaaccccaa
ctgcctgaaatttatgaggccgacgaggaagtccgggccctgattgatatggcgcgcaag
ctggagggcgtaacgcgtaatgccggtaaacacgccggcggggtggtgatatcgccaacc
aaaatcaccgatttcgcaccgctgtactgcgatgcggaaggtaaccatccggttacccag
tttgataaaagcgacgttgaatatgccgggctggtgaagttcgacttcctcggcctgaga
acgctgaccatcatcgattgggcgttggaaatgatcaacgcgcggcgggcgaagcaaggg
ctggagccgatagatatcgccgcgatcccactcgatgacaagaagagtttcgacatgctg
caacgctcggaaaccactgcggtattccagcttgaatcgcgcggcatgaaagatttgatt
aagcgcctgaagcctgactgctttgaagatatgattgcgttggtggcgttgttccgccct
ggcccgctacagtccggcatggtggataattttatcgaccgcaagcatggccgtgaggcc
atctcctatcctgatatcgaatggcagcatgagtcgcttaaaccggtgctggaaccgacc
tatggcattattttgtatcaggaacaggtgatgcagattgctcaggttctggcgggatat
acgctgggcggggcagacatgttgcgccgggcgatgggtaaaaagaacccggtcgaaatg
gccaagcagcgcggcggttttgaagaaggcgccaaatcacggggcattgacggtgagctg
gcggtcaaaatcttcgatctggtggagaaattcgccggttatggctttaacaaatcacac
tccgcggcctatgcgctggtttcctatcagacgctatggctgaaagcgcattatcccgcc
gaattcatggcggcggtgatgaccgccgatatggacaataccgataaagtggtgggactg
gttgacgaatgctggcggatggggttaaaaatcctgccgccggatattaacagcgggctt
taccatttccacgttaacgatgacggtgaaatcgtttacggtatcggggcgatcaaaggc
gtgggtgaaggcccgattgaagccattatcgaggcgcgtaatcaggatggttatttcaag
gaactgtttgatctctgcgcccggacggatatcaagaagctgaaccgcagggtactggaa
aagctgatcatgtccggggcgtttgatcgcctgggtccacaccgtgccgcgctgatgaat
tcattgggcgacgcgctgaaggctgccgatcagcatgccaaagcggaggcgatcggccag
gtcgacatgtttggcgtgctggcggacgcgccggagcaggttgaacaatcctacagcacg
gttccgccgtggccggagcaggtggtgctggacggtgagcgggagacgctggggctctat
ctgaccggccacccgatcacccagtatcttaaggaaatcgaacgctatgccagcggcttg
cgtttgaaagatatgcacccgacggagcggggaaaaatgaccacggccgtcgggctggta
ttggccgcccgcgtcatggtgaccaagcggggaaaccgcattggcgtttgtacgctggac
gatcgttcaggccgccttgaaattatgctctttaccgatgcgctggaaaaatatcagcat
ttgttggaaaaagaccgtatcctgatcgccagcggacaggtcagctttgatgactttagc
ggcgggcttaaaatgaccgtccgcgaattgatggacatcagcgaagcgcgggaaaaatat
gcgcgcgggcttgctatctcgctgaccgataggcaaattgatgaccagctattaaaccgt
ctccgccaatcgttggaaccccatcgttcggggacgatcccagtgcatctctattaccag
cgggaagatgcgcgcgcaaggttgcgcttcggcgccgcgtggcgaatcacgccgaccgat
acgttgctcaatgagctgcgcgcactcgtgggtaatgagcaggtggaactggaatttgac
taa
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