Brenneria rubrifaciens: EH207_04505
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Entry
EH207_04505 CDS
T05976
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
brb
Brenneria rubrifaciens
Brite
KEGG Orthology (KO) [BR:
brb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brb03400
]
EH207_04505
DNA repair and recombination proteins [BR:
brb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EH207_04505
Archaeal homologous recombinant proteins
EH207_04505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
nSTAND_NTPase5
cobW
ABC_tran
AAA_21
OVT1
nSTAND3
NTPase_1
SMC_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCR07843
UniProt:
A0A4V1F9K0
LinkDB
All DBs
Position
complement(953232..956915)
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNALKGEWKIDFTQPPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR
LESISAGNNEIMTRGTAECLAEVEFEVKGIGYRAFWSQRRARNAAEGKLQPPKAELSLME
NGKILCEKLTEKLTLTAEITGLDFGRFTRSMMLSQGQFAAFLNARPNERAELLEELTGTD
IYGLISERVYDKHKQARSALDALQANAAGIELLDDEQRQELEDKLALLRQQEQAVNAERE
QALTHQRWFEQLAQRQSSLATAKTQHAAAETTIFQAQSKFERLAQSEPAEKLRPRQQERN
RYQRESAELSQQIAHLKEQHQAQTTTLTALRRQEDHAVQTLRQHTDKRQQQETLINEQVI
PLDHQINTLQQQAEKQGQEWEQAAARQKATQLTLAQTAQQRQSTQQQIEQLKRYQQRHAH
HQHWGEKLPLWDTQFQRHNQFQDEIASLLQKQSAFAEQEERLALNAAALTTRQAAQQQAV
DQAQHQFTQYQQALASQEAGRPITELHRQLGQSIALRPARQQLATALALFQQLNLRQQQG
ENQQEHLRERIQQQEIEQKQQKTVWEQLHAHLDDLEKNYQMELHIVQLEAERERLQPGEA
CPLCGSTHHPAIARYQALQPSETERRLLQLRQEVSQLENELARSDAHLASLNQQLQQQLD
DASRLDDEHQTLLQQWQNVSERLQMAFIPEQSAEVTDWLAQSEAQEQRIQQQILAREQAQ
KQWQESKDSLTEANTALQNTRQAIALNHQQQHTLKNAQVELQQSLQQQQAQQTQHRQSLE
NTLKAFALSLPDREEQSTWLTQRAEEWRCWRNSEQGLQQHTNQLTALEAEYSHLTQSLEE
TTQQLQTLTQQQALQHNELKARRQQRRELFGHQKTAEVSTHLRQLSQQFEQACQQVQQQR
QQTESALSRMAGELGGVQQRQTRVAELTQQAERDFAHALQQSRFPDEAAFNNALLDEQER
HELQALKETLSQALQQAIALYRQAEQQLLAHQRQRPDTLEEDATPHTLEQALSGHHEKLK
INHQQQGEISQRLNDDRRHRQNRQALLAEIAQSQQHYDDWSCLNDLIGSQKGDKFRRFAQ
GLTLDHLVYLANQQLSRLHGRYLLQRKTSEELELQVVDTWQADSIRDTRTLSGGESFLVS
LALALALSDLVSNKTRIDSLFLDEGFGTLDAETLDTALDALDNLNASGKTIGVISHVEAM
KERIPVQIKVEKVNGLGVSRLAPEFAV
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactcagcctgcggttaaaaaatcttaatgccctgaaaggtgaatggaaaatc
gacttcactcagccgccgttctccagcaacggtttgtttgccattaccggtccgaccggc
gcgggaaaaaccacgctgctggacgccatttgtctggcgctttatcacgaaacgcctcga
ctcgaaagcatctccgccggcaataatgaaatcatgacgcgcggcacagcggaatgtctg
gctgaagtggagttcgaggtcaaaggcatcggctaccgcgctttctggagccagcgacgc
gccagaaatgcggcggagggcaagctgcaacccccgaaagccgaactgtccctgatggaa
aacggcaagatcctgtgtgaaaaactaacggaaaaactgacgctgaccgctgagatcacc
ggtctggattttggccgtttcacccgttccatgatgctgtcgcaggggcagttcgccgcc
tttctcaatgcccgtccgaacgaacgggcagaactgctggaagaactgaccgggacagac
atttacggcctgatttccgagcgtgtttatgataagcacaaacaggccagaagcgcgctg
gatgcgttgcaagccaacgccgccggcattgaactgctggatgatgagcagcgccaggaa
ctagaggacaagcttgctttgctacgccaacaggagcaagccgttaacgcggaacgtgag
caagcgctgactcatcagcgctggtttgaacaattggcacaacgccaatcctctctcgcc
acggccaaaacgcagcatgccgcggctgaaaccaccatttttcaggcccagtcgaaattt
gaaagactggcgcaaagcgaaccggcggaaaaactccgcccgcgtcagcaggagagaaat
cgctaccagcgggaatccgctgaactgtcgcagcagattgcccacctgaaggaacagcat
caagcccaaaccaccacgcttaccgcgctacgtaggcaggaagatcacgccgtccagaca
ttgcgccaacatacggataagcgccagcagcaggaaacgctgatcaacgagcaagtgatt
ccgctggatcaccagatcaacacgctgcaacagcaagcggagaagcaggggcaggaatgg
gagcaggccgcagcgcgccaaaaagcgacgcagctaacgctggctcagaccgcgcagcaa
cgccagtcgacccaacagcagattgagcagctcaagcgctaccaacagcgacacgcccat
catcaacactggggagagaaactccccctgtgggacacgcaatttcaacgtcataatcag
tttcaggatgagattgccagcctgcttcagaaacagtccgcctttgcagaacaggaggaa
cggttggcgctgaacgccgcggcgcttaccacgcggcaggcagcgcagcaacaggcggtc
gatcaggcgcaacatcagttcacacaatatcaacaggcgctggcatctcaggaagccggg
cgacccatcaccgaactgcatcggcagcttggccagtccattgcgctccgcccagcgcgt
cagcaactggccaccgcgctcgcgctgtttcaacagttgaatctccgccagcaacagggg
gagaatcagcaagaacatctgcgggagcgcatccagcagcaggagatcgagcagaaacag
caaaaaactgtgtgggaacagcttcacgcacatctggacgatctggaaaaaaactatcag
atggaattacacatcgttcaactggaagccgagcgggagcgcttgcagccaggtgaagcc
tgtccgctgtgcggctcaacccatcatcctgccattgcgcgttatcaggcgctgcaaccg
tcagaaaccgagcggcgtctgcttcaactgcgccaggaagtcagtcagttggaaaacgag
ctggcgcgtagcgacgcgcacctcgcctcattaaatcagcagcttcaacagcagttggat
gacgcatcccggcttgatgatgaacatcagacgctgctgcaacagtggcaaaatgtcagt
gagcgcttgcaaatggcgtttattcccgagcaatctgctgaagtgactgactggctggcg
caaagcgaagcgcaggaacaacggattcaacaacagatcctggctcgggaacaggcacaa
aagcagtggcaggaaagtaaggattcactgaccgaagcgaataccgcgttgcaaaacacc
cggcaggcgatcgccctgaatcatcagcaacagcacacgctgaaaaatgcgcaggtcgag
ctacaacagtcgctccagcagcaacaggcacagcaaactcaacatcggcagtcgctggaa
aacacgctaaaggcgttcgccctgtctctgccggatagggaggaacagtcaacctggctg
acgcagcgagcggaagaatggcgatgctggagaaacagcgaacaggggttacagcaacat
accaatcaactgacggcgctggaggcggaatactcgcatctgacgcagtcgcttgaggaa
acgacgcaacagttgcagacattaacgcagcaacaggcgctgcaacacaacgaactgaag
gcccgccggcaacagcgccgggagctttttggccaccagaagacggcggaagtcagcacc
caccttcgccaactcagccagcaattcgaacaggcctgtcagcaagtacagcagcagcgc
caacagacggaatcagctctcagccgtatggccggcgaactgggcggcgtccagcagcgg
caaacccgcgttgccgagttgacccaacaggccgaacgggactttgctcatgcccttcag
caaagtcgcttccccgatgaggcggccttcaacaatgcactacttgatgaacaagaacgc
catgaattacaagcgttgaaagaaacactgtctcaggcgttacaacaggcgattgccctg
tatcgccaggcggaacagcaactgctcgcccaccaacggcagcggcctgacaccctcgaa
gaagacgccaccccgcacacccttgaacaagcgttatccgggcatcacgagaaactgaaa
ataaatcatcagcagcagggcgaaatcagccaacggcttaatgacgatcgtcgacatcgc
caaaaccgacaggcgttgttagccgaaatcgcgcaaagccagcagcactatgacgactgg
agctgtctcaacgacctgattggctcccagaaaggggataaatttcggcgctttgcacaa
ggtctgacgctggatcatctggtgtatctggccaatcagcagctttcccggctgcacggg
cgttatctgctacagcgcaaaaccagcgaagaactggagcttcaggtggtggatacctgg
caggccgattcgatcagggatacccgcacgctgtccggcggcgaaagctttttggtcagc
ctggcgctggcgctggcgctttccgatctggtgagcaataaaacccgtatcgattcgctc
tttctggacgagggcttcggcacattggatgcagaaactctcgataccgcgctggatgcg
ctagataacctcaatgcatccggtaagacgattggcgtcatcagccacgtagaggcgatg
aaagagcgaattccggtgcaaatcaaagtagaaaaagtcaacggtttaggcgtcagccgt
ctggcccctgaatttgccgtctag
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