Brenneria rubrifaciens: EH207_10505
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Entry
EH207_10505 CDS
T05976
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
brb
Brenneria rubrifaciens
Pathway
brb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EH207_10505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brb03400
]
EH207_10505
Enzymes [BR:
brb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
EH207_10505
DNA repair and recombination proteins [BR:
brb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EH207_10505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Chloroplast_duf
Motif
Other DBs
NCBI-ProteinID:
QCR08926
UniProt:
A0A4P8QQX6
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All DBs
Position
2269337..2270176
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AA seq
279 aa
AA seq
DB search
MKYVGAHVSAAGGVDQAVIRAHALNATAFALFTKNQRQWEAAPLSQETIARFKAACERYA
YTPAQILPHDSYLINLGHPDEAALEKSRVAFNDEMNRCQQLGLSLLNFHPGSHLKQMSED
RCLARIAESINIALAATEGVTAVIENTAGQGSNLGFRFEHLAAIVDGVEDKSRVGVCIDT
CHAFAGGYDLRTEERCESTFAEFERVVGFRYLRGMHLNDAKSEFNSRVDRHHSLGEGNIG
KTVFSYIMKDPRFDGIPMILETVNPDIWAQEIAWLKSQA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatgtaggtgcccacgtcagcgcagccggcggcgtcgatcaggcggtcattcgc
gcgcacgcgttgaatgcaacggcgtttgcgctatttaccaaaaatcagcgccaatgggaa
gccgcaccactcagtcaggaaaccatcgcgcgttttaaagcggcttgtgaacgctatgcg
tacaccccggcgcagatcctgccccacgacagttatctgatcaacctcggccatcccgac
gaagcggcgctggagaagtctcgcgtcgcctttaatgatgaaatgaaccgctgccaacag
ctcggcttgagcttgctcaactttcatcccggcagtcatctgaaacagatgagtgaagat
cgctgtctggcacggattgccgagtcaattaatatcgcgctggcggcaacggaaggggta
accgccgtcatcgaaaataccgccggacaagggagcaatctgggatttcgcttcgagcat
ctggctgcgatcgttgacggtgtggaagataaatcccgcgtaggcgtctgtatcgatact
tgtcacgccttcgcggggggttacgacctgcgcacagaagagcgctgcgaatcgactttt
gccgaatttgaacgcgtcgtcggattccgctatctgcggggaatgcatctaaatgatgcg
aaaagcgaattcaatagccgtgtcgaccggcatcatagtctgggcgaaggcaatatcggc
aagacggttttcagctatatcatgaaagacccgcgttttgatggtatcccgatgattctg
gaaaccgtcaacccggatatttgggcacaagagattgcctggctgaaatctcaggcttga
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