Brenneria rubrifaciens: EH207_10765
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Entry
EH207_10765 CDS
T05976
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
brb
Brenneria rubrifaciens
Pathway
brb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH207_10765 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brb03019
]
EH207_10765 (rhlE)
Enzymes [BR:
brb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EH207_10765 (rhlE)
Messenger RNA biogenesis [BR:
brb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EH207_10765 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QCR08972
UniProt:
A0A4P8QP73
LinkDB
All DBs
Position
complement(2322110..2323477)
Genome browser
AA seq
455 aa
AA seq
DB search
MSFDSLGLSADILRAVEEQGYREPTPVQRQAIPVVLDGRDLMASAQTGTGKTAGFTLPLL
QLLSSREPQTKGRRPVRALILTPTRELAAQIDENVRAYSKYLRLRSLVVFGGVSINPQMI
KLRGGVDILVATPGRLLDLEHQNAVDLSQVEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDEIKTLANKLLTNPASVEVVRRNTPSELVTQHVHFVDKRRKRELLSQLI
GENNWQQVLVFTRTKHGANHLAELLEKDGITAAAIHGNKSQGARTRALANFKDGGIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAEATGEALSLVCVDEHKLLRDI
ERLLKREIPRIAVPGYEPDPSVKAEPIVNGRQGNRGGGRSGAPRAQSDRGNGDRKPADGA
RQPHKPAGNGEGPWSANDGQRRSPRPKNRGKPAAR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgattctctcggcctgagcgccgacatcttgcgcgctgttgaagaacagggc
taccgtgagcctacgcctgtacaacgtcaggcgattcctgtggtgctggacggccgtgac
ctgatggccagcgcgcaaaccggcaccggcaaaacggccggcttcacgttgcctttgttg
caattgctgagcagccgcgagccgcagacgaaaggccgccgtccggtacgggcgttgatc
ctgaccccaacccgtgagctggccgcacagattgatgaaaacgtgcgtgcctacagcaaa
tacctgcggttacgttcgctggtggtgtttggcggcgtcagcattaatccgcagatgata
aagttgcgcggcggtgtggatattctggtggcgacgccgggccgtctgcttgatctggag
catcagaacgcggttgatctgtctcaggttgaaattctggtgctggatgaagcggatcgc
atgctcgatatgggcttcattcacgatatccgccgggttctggccaagctgccggcgaaa
cgtcagaacctgttgttctcggcgaccttttccgatgagattaaaacgctggcgaacaaa
ctactgaccaatccggcctcggttgaagtggtgcgccgcaacaccccgtcggaactggtt
acgcagcatgtacattttgtggataagcgccgtaagcgcgaactgttgtctcagttgatt
ggcgagaataactggcagcaggtgctggtatttacccgaaccaaacacggcgccaaccac
ctggccgaactgctggaaaaagacggcatcaccgcggcggcgatccacggcaataaaagt
cagggagcgcgtacccgagcgttggcgaattttaaagatggcggcattcgcgtattggtg
gcgacagatatcgccgctcgcggtctggatatcgatcaactgccgcatgtggtcaactat
gagctgccgaacgtgccggaagactacgttcatcgcatcggccgcaccggtcgggcggaa
gcgaccggcgaagccctgtcgctggtgtgtgtggacgagcataaactgctgcgtgacatc
gaacgtctgctgaagcgtgaaattccgcgcattgcggtgccgggctatgagcctgacccg
tcggttaaagccgagccgatcgttaatggtcgtcagggcaatcgcggcggcggccgttcc
ggtgcgccacgcgcgcaatccgaccgagggaacggcgatcgcaaacccgccgacggcgct
cgtcagccgcataaaccggcaggcaatggcgaaggtccgtggagcgccaacgacggtcaa
cgccgttcgccgcgtcccaaaaaccgcggcaagcccgctgcgcgctaa
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