Brenneria rubrifaciens: EH207_12925
Help
Entry
EH207_12925 CDS
T05976
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
brb
Brenneria rubrifaciens
Pathway
brb00260
Glycine, serine and threonine metabolism
brb00460
Cyanoamino acid metabolism
brb00630
Glyoxylate and dicarboxylate metabolism
brb00670
One carbon pool by folate
brb00680
Methane metabolism
brb01100
Metabolic pathways
brb01110
Biosynthesis of secondary metabolites
brb01120
Microbial metabolism in diverse environments
brb01200
Carbon metabolism
brb01230
Biosynthesis of amino acids
brb01240
Biosynthesis of cofactors
brb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
brb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EH207_12925
09102 Energy metabolism
00680 Methane metabolism
EH207_12925
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EH207_12925
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
EH207_12925
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
EH207_12925
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
EH207_12925
Enzymes [BR:
brb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
EH207_12925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
OKR_DC_1
SapB_1
Motif
Other DBs
NCBI-ProteinID:
QCR09349
UniProt:
A0A4P8QV19
LinkDB
All DBs
Position
complement(2831761..2833014)
Genome browser
AA seq
417 aa
AA seq
DB search
MLKREMNIADYDAELWQAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKALFGADYANVQPHSGSQANFAVYTALLQPGDTILGMN
LAHGGHLTHGSPVNLSGKLYNVVPYGIDASGKIDYEEMAELARTHKPKMIVGGFSAYSGV
VDWAKMREIADSIGAYLFVDMAHVAGLVAADVYPTPIPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAQAMVE
VFLSRGYNVVSGGTSNHLFLLDLVSKNITGKEADAALGRANITVNKNSVPNDPKSPFVTS
GVRIGTPAATRRGFKEAEVRELAGWICDVLDNINDESTIERIKQKVLDICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgccgaactgtggcaagcaatggag
caggaagtggtgcgtcaggaagaacatattgaactgattgcgtcagaaaactacaccagc
ccacgcgtcatgcaggctcagggttctcaactgaccaacaaatatgctgaaggctatccc
ggcaaacgctattacggcggctgcgagtatgtggatgtggttgagcagttggctatcgat
cgcgccaaagcgctgttcggtgctgattatgccaacgtgcagccccactccggctctcag
gctaacttcgctgtttataccgcgctgttacagccgggtgatactattctgggaatgaac
ctggcgcacggcggccacctgactcacggctctccggtcaacctgtctggcaaactctac
aacgtggttccttacggtattgatgcaagcggcaagattgattacgaagaaatggctgag
ttggctcgtacccacaaacccaaaatgatcgttggcggtttttccgcctactctggtgtg
gttgactgggccaaaatgcgtgaaattgccgacagcatcggggcttacctgttcgttgat
atggcgcacgttgcgggtctggttgccgcagacgtgtatccgaccccgattcctcatgcg
catattgtcaccaccacgacccacaaaacgctggcgggtccgcgtggcggactgattctg
gcgaaaggcggtgacgaagaactgtacaaaaaactgaactccgcagtattcccgggcggt
cagggcggcccgctgatgcatgttatcgcgggtaaagcggtggcgctaaaggaagccatg
gagcccgagttcaaggtttatcagcaacaagtggcgaaaaacgcccaggctatggtcgag
gtcttcctgtctcgtggttataacgtggtttccggcggcaccagcaaccatctgttcctg
ctggatttggtgagcaaaaatattaccggtaaagaagctgacgccgcgttgggccgtgcg
aacatcaccgttaataaaaatagcgtgccgaacgatcccaaaagtccgttcgttacttct
ggtgtgcgtatcggcacgcccgcagcgacgcgacgtggttttaaagaagcggaagttcgt
gaactggccggttggatctgtgatgtgctggataacatcaatgatgaatccaccatcgag
cgcattaaacaaaaagttctggatatctgcgctcgtttcccggtttacgcataa
DBGET
integrated database retrieval system