Brenneria rubrifaciens: EH207_13480
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Entry
EH207_13480 CDS
T05976
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
brb
Brenneria rubrifaciens
Brite
KEGG Orthology (KO) [BR:
brb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brb03016
]
EH207_13480 (truD)
Enzymes [BR:
brb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EH207_13480 (truD)
Transfer RNA biogenesis [BR:
brb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EH207_13480 (truD)
Prokaryotic type
EH207_13480 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QCR10373
UniProt:
A0A4V1FAA3
LinkDB
All DBs
Position
complement(2957725..2958771)
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AA seq
348 aa
AA seq
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MDNNEALVWLHGEPQASGRLKSTAEDFGVIEDLGFQPDGDGEHILVRIRKRGYNTQSVAE
ALAKFCRLPQRAVSYAGLKDRHAVTEQWFCLHIPGKTSPDLNAFQMEGCDVLEFARHRRK
LRIGALQGNDFSLVLRQISDRADVESRLRQIAERGVPNYFGSQRFGREGNNLEQARRWAN
NDIQVKERSKRGFYLSASRSALFNQVASARIARQQAKTVWCGDALQLTGRGSWFVVKPDE
LLDLQTRLDAGELQVTAPLPGDGALGTQDIALAFEQQTLIGQETLLSLLQRERVEPARRA
ILLYPQRMRWNWPDESTVELTFWLPAGSFATSVVREIINQQQESDIVA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggataacaatgaagcgctagtctggctgcacggtgagccgcaggcatcagggaggctg
aagtctaccgcggaagactttggcgttattgaagatctggggtttcagccggatggcgat
ggtgagcatattctggttcgtatccgcaagcgtggttacaatacacaatctgtggctgaa
gcgctggcaaaattttgccgcctgccgcaacgtgcggtgagttacgcgggcctgaaggat
cgccatgccgttacagaacaatggttctgcctccatattccaggtaagacatcaccggat
ttgaacgccttccagatggaaggttgcgacgtgcttgaatttgctcgtcatcgccgtaaa
ttgcgtattggcgcattacaaggcaacgacttttcgctggtattacgtcagataagcgat
cgtgcggacgtggagtcccgcctgcgacagattgctgagcgcggcgtacctaactatttt
ggcagccagcgattcggcagagaagggaataatctcgaacaggcccgacgctgggcgaac
aatgacattcaggtaaaagaacgcagtaaacgcggtttttatctttccgccagccgcagt
gcgctatttaatcaggttgccagcgcaagaattgcgcggcagcaggctaaaaccgtctgg
tgcggcgatgcgttacaattaaccggccgaggaagctggtttgtcgtcaaaccggatgaa
ttgctggatttacagacgagacttgatgcgggcgagcttcaggtgaccgcgccattaccc
ggtgacggtgcgctgggtactcaagatatcgcattggcttttgagcaacaaacgctgatc
gggcaagaaacgttgctgtcgttattacagcgcgaacgggtcgaacccgcccgacgcgcg
attttactgtatccgcagcgtatgcgctggaactggccggatgaaagtacggttgaactg
acattctggttgccggcgggcagttttgcgaccagcgtggtacgtgaaattatcaaccag
caacaagaatcggatattgttgcctga
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