Brenneria rubrifaciens: EH207_15005
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Entry
EH207_15005 CDS
T05976
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
brb
Brenneria rubrifaciens
Pathway
brb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
brb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EH207_15005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brb03019
]
EH207_15005
03009 Ribosome biogenesis [BR:
brb03009
]
EH207_15005
Messenger RNA biogenesis [BR:
brb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EH207_15005
Ribosome biogenesis [BR:
brb03009
]
Eukaryotic type
Pre-60S particles
RNases
EH207_15005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RE_XamI
Motif
Other DBs
NCBI-ProteinID:
QCR09714
UniProt:
A0A4P8R214
LinkDB
All DBs
Position
complement(3356649..3357191)
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AA seq
180 aa
AA seq
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MVDENNLIWIDLEMTGLNPEQDRIIEIATLVTDANLNVLAEGPVLAVHQSDSQLALMDDW
NVRTHGASGLIDRVKASPVDEREAERVTLAFLQQWVPAGKSPICGNSIGQDRRFLFRYMP
ELEAYFHYRYLDVSTLKELARRWKPEILAGFKKQGTHQAMDDIRESLAELAYYREHFIQL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggtagatgaaaataacctgatctggatcgatcttgagatgacgggattgaaccctgaa
caggatcgtatcattgagattgcgacattggtgacagacgccaatctgaatgtgttggcg
gaagggccggttctagccgttcatcagtcggatagccagctcgcgctgatggatgactgg
aatgtgcgcacgcacggggctagcggtctgatcgaccgagtgaaagccagcccggttgac
gagcgtgaggctgaacgggtcacgttggcttttttacaacagtgggtgcccgcgggtaaa
tcaccgatttgcggtaacagtattggtcaggatcgccgttttctgttccgctatatgccg
gagctggaagcctatttccactatcgttatctggatgtcagtacgcttaaggagctggca
cgccgctggaaaccggagattctggccgggtttaaaaagcagggcacgcatcaggcgatg
gatgatattcgcgaatcgctggcggaactggcttattaccgcgagcattttattcagctt
taa
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