Brenneria rubrifaciens: EH207_15975
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Entry
EH207_15975 CDS
T05976
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
brb
Brenneria rubrifaciens
Pathway
brb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH207_15975 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brb03019
]
EH207_15975 (recQ)
03400 DNA repair and recombination proteins [BR:
brb03400
]
EH207_15975 (recQ)
Enzymes [BR:
brb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EH207_15975 (recQ)
Messenger RNA biogenesis [BR:
brb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EH207_15975 (recQ)
DNA repair and recombination proteins [BR:
brb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EH207_15975 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QCR09874
UniProt:
A0A4P8R2H0
LinkDB
All DBs
Position
complement(3581069..3582895)
Genome browser
AA seq
608 aa
AA seq
DB search
MSTAEVLNKETFAVRVLRETFGYQQFRPGQQEIINATIGGQDCLVVMPTGGGKSLCYQIP
ALVMDGLTLVVSPLISLMKDQVDQLQAYGVPAACLNSTQTREQQFEVMAGCRTGQIKLLY
IAPERLTTDGFLDQLIHWQPALIAVDEAHCISQWGHDFRPEYRALGQVKQHFPTLPIIAL
TATADETTRRDIIRLLDLQSPLIQISSFDRPNIRYTLVEKFKPLDQLWMFVQGQRGKSGI
IYCNSRAKVEDISARLQSRGLSVAAYHAGLENARRAQVQEAFQRDDLQVVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCLEEKPAGQQ
LDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQQTCGNCDICLDPPQRYDGLVDAQKAL
SCVYRVGQRFGMSYIVEVLRGANNQRIREYGHDKLPVYGIGREKSQEHWVSVLRQLVHLG
LLSQNIAQHSALQLTESARSVLRGEVPLQLAVPRVINLKPRVSQKSYGGNYDRKLFAKLR
KLRKSIADEANVPPYVVFSDATLLEMAELMPINAGELLNINGVGHRKLERFGSPFMSMIR
DHVDNDDE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggcggaagtattgaataaggaaacgtttgctgttcgggttttacgggagacg
tttggctaccagcagttccggccgggtcagcaagagatcatcaacgcgacgatcggcggg
caggactgcctggtcgtgatgccgacgggcggcgggaaatcactctgttatcagatcccc
gcgctggtgatggatggcttgacgctggtcgtgtcgccccttatttcgctgatgaaagat
caggtcgatcagttacaggcttatggcgtaccggccgcctgcctgaactccacccagaca
cgcgagcaacagtttgaggtgatggcgggctgtcgcaccgggcagatcaagctgctgtat
atcgcgccggagcgtctgacgacggacggttttctcgaccagctcattcactggcagccg
gcattgattgcggtggacgaagcgcactgcatttcccagtggggtcatgattttcggccg
gaataccgggcgctgggacaggttaaacagcatttccccacactgccgatcattgcgcta
accgccaccgccgatgaaaccacgcggcgcgatattattcgactgctggatcttcagtcg
cctctcattcaaatcagcagttttgaccgacccaatattcgttacacgctggtggagaaa
ttcaaaccgctcgaccaactgtggatgtttgttcaggggcagcgcggcaaaagcggcatt
atttattgtaacagccgggcgaaggtggaagacatcagcgctcgtctgcaaagccgcggg
ctaagcgtggcggcctatcacgccgggctggaaaatgcgcgccgtgcgcaggtgcaggaa
gccttccagcgtgacgatcttcaggtcgtggtggcgacggtcgctttcggtatggggatc
aacaagccaaacgtacggtttgtggtgcattttgatatcccgcgcaatatcgaatcctat
tatcaggaaaccggacgcgccgggcgtgacggcctggccgcagaagcggcgctgttttac
gatccggcggatatggcgtggctgcggcgttgtctggaagaaaagcccgccggacaacag
ttggacattgagcgtcataagctgaacgctatgggcgcgtttgccgaggcacaaacctgt
cgtcgtctggtgttgctgaactatttcggggagggccgccagcagacttgcggtaactgt
gatatctgcctcgacccgcctcagcgttatgatggtctggttgacgcgcagaaagcgctt
tcctgcgtgtatcgggtggggcaacgctttgggatgagctacatcgttgaagtgctgcgc
ggggcgaataaccaacgtatccgcgagtacggccacgataaactgccggtttatggcatc
gggcgggaaaagtcgcaggaacactgggtcagcgtgttgcgccaactggttcacctcggt
ttactgagccagaatatcgcccagcattccgcgttacagcttaccgaatcggcgcggtcg
gtgctgcgtggcgaagtgcctttgcaactggccgtaccgcgggtgataaacctgaaaccg
cgcgtcagtcagaaatcctacggcggaaactatgatcgaaaattgttcgctaagctgcgc
aagttgcgtaaatccattgccgacgaagccaatgtgccgccctatgtggtgttcagtgac
gccaccttgctggaaatggctgagctgatgccgatcaacgcgggtgaactgctaaacatc
aatggcgtaggccatcgtaaacttgagcgttttggttcgcctttcatgagcatgatccga
gatcacgttgataatgatgacgagtga
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