Brenneria rubrifaciens: EH207_16010
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Entry
EH207_16010 CDS
T05976
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
brb
Brenneria rubrifaciens
Pathway
brb03420
Nucleotide excision repair
brb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EH207_16010
03430 Mismatch repair
EH207_16010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brb03400
]
EH207_16010
Enzymes [BR:
brb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EH207_16010
DNA repair and recombination proteins [BR:
brb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EH207_16010
MMR (mismatch excision repair)
Other MMR factors
EH207_16010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCR09881
UniProt:
A0A4P8QRV3
LinkDB
All DBs
Position
complement(3589319..3591481)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSELLDGLNDNQRAAVAAPRGNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSVMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHMDAGLPQDFQILDSDDQL
RLLKRLIRALNLDEKQWPPRQAMWYINGKKDEGLRPQHIESYGNPIEQTWQRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHVLNHYRERFTNILVDEFQDTNRIQYAWIRILAGDS
AKVMIVGDDDQSIYGWRGAQVENIQLFLKDFTGAETIRLEQNYRSTSNILKAANALIAHN
GGRLGKNLWTDGVDGEPISLYCAFNELDEARFVVNRIKVWQENGGALNDNAILYRSNAQS
RVLEEALLQQSMSYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQSTRVLLQDKVLAGRASASLQRFMELVDALAYETAELPLHVQ
TDRVIKDSGLWSMYEQEKGEKGQARIENLEELVTATRQFSYQDEDQDLMPLQAFLSHAAL
EAGEGQADANQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAESRRLYGKEAYHRPSRFVGELPPECVEEVRLRASVSRPVNHRRLG
TPVSQNDSGYSLGQRVRHTKFGEGTIVNLEGSGDHCRIQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgaactgctcgatggcctcaacgacaatcaacgcgctgcggtagccgcg
ccgcgtggcaatttattggtgctggccggggcaggcagtggcaaaacccgggtattggtg
caccgtattgcctggctgctgtccgtcgaaaattgctccccttattccgttatggcggtg
acctttaccaataaggcggcagcggaaatgcggcaccgcatcgagcacttgatcggcacc
agtcagggcgggatgtggattggcacttttcatggcttagcccaccgtttgctgcgcgcg
caccatatggatgccgggttgccgcaggattttcagattctggacagcgatgatcaactg
cggttgctcaaacgtctaatacgagcgctgaatctggatgagaagcagtggccgccgcgt
caggccatgtggtacatcaacggaaaaaaagacgaagggttgcgtccccaacatatcgaa
agttacggcaacccaatcgaacaaacctggcagcgagtttatcaagcctatcaggaagcc
tgcgatcgcgccgggctggtggattttgccgaattgctgctgcgcgcgcacgaactgtgg
ctgaacaaaccgcacgtgctgaaccattaccgtgagcgctttaccaatattttggtggat
gagtttcaggataccaaccgtatccagtatgcatggattcgcatactggcaggcgatagc
gccaaggtgatgatcgttggcgatgacgaccagtcaatctatggctggcgtggggctcag
gttgaaaatatccaattgttcctgaaagactttaccggcgctgagacgatccggctggag
cagaattaccgttcaaccagcaacatcctgaaggcggccaacgcgctgattgcgcacaac
ggcggacgcctggggaaaaatctgtggacggacggcgtggatggcgagccgatttcactc
tactgtgcatttaatgaactggacgaagcgcggtttgtcgtcaaccggattaaagtctgg
caggaaaacggcggcgcgttgaacgataacgctatcctataccgtagcaacgcccagtcg
cgtgtgctggaagaagcgctgttacaacaaagcatgtcttaccgtatttacggcggcatg
cggttctttgagcgtcaggaaataaaagatgcgttggcgtatcttcgtctgattgccaac
cgtaatgatgatgcggcgtttgagcgggtggtgaataccccgacgcgcggcattggcgac
agaacgctggatgtggtgcgccaaaccgcccgcgacagacagttgacgttgtggcagtca
acccgagtgttattgcaggacaaagtgctggcgggacgcgcaagcgcctcgctacagcgc
tttatggagctggttgatgcgctggcttatgaaaccgccgaactgccattgcatgtgcag
acggatcgggtgattaaagattccggcctgtggagcatgtacgagcaggagaaaggggag
aaaggtcaggcgcggatagaaaaccttgaagaactggtcaccgccacgcgacaattcagc
tatcaggatgaagaccaggatctgatgccgttacaggctttcttgtcgcacgcggcgctg
gaggcaggagaaggccaggcggacgccaatcaggacgcggtgcaactcatgacgctgcat
tcggcgaaagggctggagtttccgcaggttttcatcgtcgggatggaagagggcatgttc
cccagccagatgtcgctggatgaaggcggccggctggaagaggaacgccggctggcctat
gtgggcgtgacccgcgccatgcaaaagctgacgttgacctatgcggaatcccggcgttta
tacggcaaagaagcttatcatcgtccttcgcgttttgtgggagagttgccgcccgaatgc
gtcgaagaagtccgcttgcgggccagcgtctctcgcccggttaatcaccggcgcctggga
acgccggtcagccagaatgacagtggttattcgctgggccagcgggttcggcacactaaa
tttggtgaaggcaccatcgttaatcttgagggtagcggtgatcattgccggattcaggtg
gcgtttcagggacagggaattaaatggctggtggcggcttacgcccgacttgaaacggtg
tga
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