Brenneria rubrifaciens: EH207_16190
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Entry
EH207_16190 CDS
T05976
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
brb
Brenneria rubrifaciens
Pathway
brb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH207_16190 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brb03019
]
EH207_16190 (rhlB)
Enzymes [BR:
brb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EH207_16190 (rhlB)
Messenger RNA biogenesis [BR:
brb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EH207_16190 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
CCDC138_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
QCR09911
UniProt:
A0A4P8QRX5
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All DBs
Position
3625543..3626832
Genome browser
AA seq
429 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPLVIEALESKGFHNCTPIQALALPLALSGRDVAGQAQTGTGKT
LAFLASTFHYLLSHPANAERQINQPRALIMAPTRELAVQIHSDAEALSRLTGLKLGLAYG
GDGYDKQLKVLESGVDILVGTTGRLIDYVKQNHINLGAIQVVILDEADRMYDLGFIKDIR
WLFRRMPPVTQRLNMLFSATLSYRVRELAFEQMNNAESVEVEPDQKTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPDRCIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTNGNLDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGQSGFSISLA
CEEYALNLPAIETYIGHGIPVSKYNSDALLTDLPAPKRLTRPTRNNHGPRRNNASRRSGA
PRNNRKRPG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaacagaacagaagttttccgacttcgccctgcacccgctggtt
atcgaagctcttgaaagtaaagggtttcataactgtacacctattcaggcgttagcattg
ccgctggctttgtcagggcgtgatgtagcaggtcaggcgcaaaccggtactggcaagacg
ctggcttttctcgcgtctactttccattatttgctttcgcatcctgcaaacgcagagcgt
cagatcaatcagccgcgtgctttaatcatggcgccgacgcgtgaattagccgtgcaaatt
cactctgacgcagaagccctttctcgcctgacaggattgaaacttggtctggcttatggc
ggcgatggctacgacaaacagcttaaggtactggaaagcggcgtcgatattctggttggc
actacaggccgcctaatcgactacgtcaaacagaatcatattaatctgggcgcaattcag
gtcgtgattctggatgaagctgatcgcatgtacgacctcggctttatcaaagatatccgc
tggctgttccgtcgcatgccgccggtaacccagcgactaaacatgcttttttccgcgacg
ctttcctatcgcgtacgtgaactcgcttttgaacaaatgaataacgccgagtctgtggaa
gtcgaaccagatcaaaagaccggccaccgcatcaaagaagagctattttatccgtctaat
gaagaaaaaatgcgcctgctccagacgctgctcgaggaagagtggccggatcgctgcatt
attttcgccaataccaaacaccgctgtgaggatatctggggccacttggccgccgacggc
caccgcgtcggtctgttgacgggtgacgtggcgcagaaaaaacgcctgcgtattctggat
gaattcaccaacggcaatctggacattctggttgcgactgacgtagcggcacgcgggctg
catattccgtcagtcacgcatgtcttcaactacgatctgccggatgattgtgaagactat
gtccaccgtatcggccgtaccggtcgcgcaggccaaagcggtttctccatcagtttggcc
tgtgaagaatacgcgctgaatctgcccgctatcgaaacctacattggtcacggtattccg
gtcagcaaatacaacagcgatgcactacttaccgatttaccggcgcccaagcgcttaacg
cgcccgacacgtaacaatcacggcccgcgcagaaataacgcttcgcgccgcagcggagcg
ccccgtaacaatcgtaaacggccgggttga
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