Brenneria rubrifaciens: EH207_17630
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Entry
EH207_17630 CDS
T05976
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
brb
Brenneria rubrifaciens
Pathway
brb03030
DNA replication
brb03410
Base excision repair
brb03420
Nucleotide excision repair
brb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EH207_17630 (polA)
03410 Base excision repair
EH207_17630 (polA)
03420 Nucleotide excision repair
EH207_17630 (polA)
03440 Homologous recombination
EH207_17630 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brb03032
]
EH207_17630 (polA)
03400 DNA repair and recombination proteins [BR:
brb03400
]
EH207_17630 (polA)
Enzymes [BR:
brb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EH207_17630 (polA)
DNA replication proteins [BR:
brb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EH207_17630 (polA)
DNA repair and recombination proteins [BR:
brb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EH207_17630 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EH207_17630 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Prok-E2_E
DUF5113
Motif
Other DBs
NCBI-ProteinID:
QCR10148
UniProt:
A0A4P8QSS6
LinkDB
All DBs
Position
complement(3927136..3929925)
Genome browser
AA seq
929 aa
AA seq
DB search
MAQIAEPPFILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYRPSHVAV
VFDAKGKTFRDELFESYKAHRPPMPDDLREQIEPLHQMVKAMGLPLLAVSGVEADDVIGT
LALQAEKAGTPVLISTGDKDMAQLVTPNVTLINTMNNTILGPHEVCEKYGVPPALIIDFL
ALMGDSSDNIPGVPGIGEKTAQALLQGIGGLDSLYANLDKIAKLSFRGAKTIAPKLEKNK
EVAYLSYQLATIKTDVELDLKCEQLTVKEPDIDELHRLFSRYEFKRWLSDIASGTWLQDK
KSRSPAPKVVKTAEKHVGETETVSVLSADGYVTIMDEKTLLEWIERLKNADVFAFDTETD
GLDTLTANLIGLSFSIKPGEAAYLPLAHDYLDAPAQPDRDRVLALLKPLLEDEKRLKVGQ
NLKFDKGVMKRYDIELRGIAFDTMLESYVLDSVAGRHDMDSLAERYLHHKTITFEEIAGK
GKNQLTFNQIALEQAGPYAAEDADVTLHLHQKLWGKLQQQAELRQVFQTIDMPLVPVLSR
MERAGVLIDPVILSEHSKELTVRLVGLETEAYELAGEEFNLSSTKQLQGIFYEKQKLPIL
KKTPKGAPSTNEEVLAELALDYPLPKLILEYRGLAKLKSTYTDKLPLMINPATKRVHTSY
HQAVTATGRLSSSDPNLQNIPVRNEEGRRIRQAFIAPKGYSIVAADYSQIELRIMAHLSG
DKGLLSAFSDGLDIHRATASEVFGVALDKVTSEQRRSAKAINFGLIYGMSAFGLSRQLNI
PRHESQKYMNLYFERYPGVQEYMDRTRQQAAELGYVSTLDGRRLYLPDIRSRNAMARKAA
ERAAINAPMQGTAADIIKKAMIAIDDWLQQDKPLVNMIMQVHDELVFEIQDSVLEESKSK
IRELMEGCMQLNVPLRVDIGTGMNWDEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattgcagaacccccatttatcctggtagacggctcatcctatttgtaccgt
gcttatcatgcgttcccaccgttaacaaatagtgcaggggagccaaccggtgcgatgtat
ggcgtgttaaacatgcttcgcagtttgttgctgcaataccgccccagccatgttgcggtg
gtatttgacgcgaaaggcaagacattccgtgatgagttattcgaaagctacaaggcgcat
cgtcccccgatgccggatgatttacgcgaacagattgagcctttgcaccagatggtcaag
gcaatggggttgccattgcttgctgtttccggcgtggaagcggacgacgtaattggtacg
ttggctttgcaggcagagaaagccggaacgcccgtgctgattagcaccggtgataaagac
atggcgcagttggtcacgccgaacgtgacgcttatcaacaccatgaacaacactatcctc
ggcccgcacgaagtatgtgaaaaatacggggttccaccagcgctgattattgatttcctt
gcgttaatgggagactcgtccgataacattcccggcgttcccggtattggtgagaagacg
gcacaagcgctgctacagggcatcggtggtctggattcgttatatgccaatctggacaag
atcgctaagctttcatttcgtggtgccaaaacgatagcccctaagctcgaaaaaaataaa
gaggttgcgtacctttcctatcagcttgccacgattaaaacggatgttgagcttgacctg
aaatgtgagcagttgacggtcaaagaaccggatatcgatgaactgcaccgtttattttcc
cgttatgagttcaagcgttggctgtccgatattgcatctggcacctggctgcaagacaaa
aaaagtcgttcaccggcaccgaaggttgtcaaaacagcggaaaaacatgtcggcgagaca
gaaacggtgtcggtactttctgctgatggctatgtcaccatcatggatgaaaagacgctg
ctggaatggattgagcggttaaaaaatgccgatgtttttgcctttgataccgaaacagat
gggttggatacactgaccgccaacctcattggactgtcgttttcgataaaaccgggtgag
gccgcttacctgccattggcccatgattatttggatgcgccagcacaaccggatcgcgat
cgggtattggcgttgcttaaaccactgttggaagacgaaaaacggttgaaggtcggtcag
aacctcaaatttgataaaggtgtaatgaaacgctatgacatcgaattacgtggcatcgcg
tttgataccatgctcgagtcttatgtcttggacagcgttgccggacgtcacgatatggat
agcctcgctgaacggtacttgcatcataaaacgatcacgtttgaggagattgccggcaag
ggcaaaaatcagctgacatttaatcagatcgcgctggagcaagctggcccgtatgcagcg
gaagatgcggatgtcacattgcatctgcatcagaaattgtgggggaaattacaacagcag
gctgaactgcgccaggtatttcagaccatcgatatgccattggtgcccgtgttgtccaga
atggaacgggctggggtgttgattgaccccgtgattctgtctgagcactctaaagaattg
acggttcgtctggtcgggttggaaacggaggcctacgaactggctggcgaagagttcaat
ttgtcatcgacaaagcaacttcaaggcattttctacgaaaagcagaagttgcctatcctg
aaaaaaacgccaaaaggcgcgccttccaccaatgaagaagtgttggctgaattggcgttg
gactatccgctgccgaagctgatccttgagtatcgcgggctggcgaagctgaagtctact
tacaccgataaactgccgttgatgattaatccggcaaccaagcgagtgcatacttcatat
catcaggcggtgacggcgaccggtcgtctgtcatccagcgatcccaacctgcaaaatatt
ccggtgcgtaacgaagaagggcgccgtatccgccaggcttttatcgccccgaagggatac
agcattgttgccgcggactattcgcagattgagctgcgcattatggcgcatctttccggc
gataaaggtttactgagcgcgttctctgatgggctggatattcaccgtgccacggcttcg
gaagtcttcggcgttgcgctggataaggtgacgtcggaacagcgtcgtagcgcaaaagcc
attaatttcggcctgatatatggaatgagtgcatttgggctgtcgcgccagttgaacatt
ccccgccatgaatcacagaaatacatgaacttgtattttgaacgctaccccggtgttcag
gaatacatggatcgtacccgccagcaggctgcggagctgggctatgtttccacgctggat
ggtcgccgtctctatttaccggacattcgttctcgtaacgcaatggctcgtaaggcggcg
gagcgcgcggctatcaacgccccgatgcaggggacggcagccgacattatcaagaaagcg
atgatcgcgattgatgactggttacaacaggataagccgctcgtgaatatgatcatgcag
gttcacgatgaattggtttttgagattcaagattcggttctggaagaatctaaaagtaaa
atcagagagttgatggaagggtgtatgcaactcaatgttccgctacgggtcgatattgga
accggcatgaactgggatgaagcacattag
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