Bradyrhizobium sp. CCGE-LA001: BCCGELA001_01910
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Entry
BCCGELA001_01910 CDS
T04273
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
brc
Bradyrhizobium sp. CCGE-LA001
Brite
KEGG Orthology (KO) [BR:
brc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brc03016
]
BCCGELA001_01910
Enzymes [BR:
brc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BCCGELA001_01910
Transfer RNA biogenesis [BR:
brc03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BCCGELA001_01910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AMA55150
UniProt:
A0A109Q9H7
LinkDB
All DBs
Position
399563..400099
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AA seq
178 aa
AA seq
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MPRLFTGLEIPAEIGQSLSNLRGGLPGARWIDPENYHVTLRFIGDIDGVSANEIASMLFR
VDRKPFEVKVQGLTSFGGRKPRAVVATIVPSKPLMDLQAELERMMQRIGLDPEGRKFIPH
VTLARLHDATDRDVADYLSLRGYFPSKAFLAERFVLFSSRASTGGGPYVVEDAYELCE
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtttgttcaccggtctggaaattccggccgagatcggccagtcgctttccaac
ttgaggggcggcctccccggcgcccgctggatcgatcccgaaaattatcacgtcaccctg
cgcttcatcggcgacatcgacggcgtctccgccaacgagatcgcctcgatgctgtttcgc
gtcgaccgtaagccgttcgaggtgaaggtgcaggggctcacgagcttcggtggccgcaag
ccgcgcgcggtcgtcgccacgatcgtgccgagcaagccgctgatggacttgcaggccgag
ctcgaacgcatgatgcagcggatcggcctcgatcccgaggggcgcaagttcatcccgcac
gtcacgctggcccggttgcacgatgccaccgaccgcgacgtcgccgactatctctcgctg
cgcggctacttcccgagcaaggctttcctggctgaacgcttcgtgctgttctcctcgcgt
gcgtcgacgggcggcggaccatatgtcgtcgaggacgcctacgagctgtgtgagtag
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