Bradyrhizobium sp. CCGE-LA001: BCCGELA001_02660
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Entry
BCCGELA001_02660 CDS
T04273
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
brc
Bradyrhizobium sp. CCGE-LA001
Pathway
brc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCCGELA001_02660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brc03019
]
BCCGELA001_02660
03400 DNA repair and recombination proteins [BR:
brc03400
]
BCCGELA001_02660
Enzymes [BR:
brc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BCCGELA001_02660
Messenger RNA biogenesis [BR:
brc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BCCGELA001_02660
DNA repair and recombination proteins [BR:
brc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BCCGELA001_02660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
Helicase_C
DEAD
RecQ_Zn_bind
HHH
Motif
Other DBs
NCBI-ProteinID:
AMA55278
LinkDB
All DBs
Position
573487..575355
Genome browser
AA seq
622 aa
AA seq
DB search
MSSPSTAPLPAPANGRDALSVLHSVFGLPGFRGAQGEIVRHVTDGGNCLVLMPTGGGKSL
CYQLPSLLREGCGIVVSPLIALMRDQVAGLLEAGVNAAALNSSLSPQEASEVERRLIAGD
LDLLYVAPERLVTPRCLSMLAQARVALFAIDEAHCVSQWGHDFRPEYVGLSIIAERFPEV
PRIALTATADELTRKEIVERLQLTGAPQFVSSFDRPNIRYEIVDKRNAVSQLKEFIRERH
MGDAGVVYCLSRNRVEEVAAALQDAGIAALPYHAGLDGSVRSRNQDRFLNEDGIVIVATI
AFGMGIDKPDVRFVAHLDLPKSIEAYYQETGRAGRDGKPSAAWMAYGLSDIVQQRRMIDE
STASEDFKRVSIGKLDALVGLAETAHCRRRRLLAYFGEIVMGESCGNCDNCLTPPKMRDG
KVLAQKLLSCVYRTGQRFGAMHLIDVLVGRLTEKVTQFGHDKLSVFGIGRELNEKQWRTV
LRQLVAMGHLQSDSEAYGALKLTDSSRGVLRGETEVWLREEAPGTRVRSSRAKSRRGDLA
PAASATPQGDVDPELRARLRSWRSDIARERGVPAYVVLHDATIDGIVRAWPTTLDELRNV
PGIGDKKLEHYGEELLQIVRTR
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctccctccaccgctccactgccagcgccggccaatggccgcgatgcgctgtcg
gtgctgcattcggtgttcggcctgcccgggttccgcggcgcgcagggtgagatcgtcagg
cacgtgacggatggcggcaattgcctggtgctgatgccgaccggcggcggcaagtcgctg
tgctatcagctgccctcattgctgcgcgaaggctgcggcatcgtggtctcgcccttgatc
gcgctgatgcgcgaccaggtcgcgggcctgctcgaagccggcgtcaacgccgctgcgctg
aactcgtcgctgtctccgcaggaagcctcagaggtggagcgccgcctgatcgcgggcgat
ctcgatttgctctacgtcgcgcccgaacggctggtgacgcctcgctgcctgtcaatgctg
gcgcaggcgagagtggcgctgttcgcgatcgacgaggcgcattgcgtctcgcaatggggc
catgatttccggcccgaatatgtcggcctctccatcattgccgagcgctttcccgaagtg
ccgcgcatcgcgctgaccgcgaccgccgacgagctgacgcgcaaggagatcgtcgagcgg
ctgcagctgaccggcgcgccgcaattcgtctccagcttcgaccggcccaacatccgctac
gagatcgtcgacaagcgcaatgcggtgtcgcagctgaaggagttcatccgcgagcgccac
atgggcgatgccggcgtggtctattgcctctcgcgcaatcgcgtcgaagaggtcgccgct
gcgcttcaggacgccggcatcgcggcgctgccctatcacgccggcctcgacggcagcgtg
cgctcgcgcaaccaggaccgcttcctcaacgaggacggcatcgtcatcgtcgcgaccatc
gccttcggcatgggcatcgacaagccggacgtgcgcttcgtcgcccatctcgatctgccc
aagagcatcgaggcctattaccaggagacgggacgcgccggccgcgacggcaagccgtct
gcggcgtggatggcctatggtctttccgacatcgtgcagcagcgccgcatgatcgacgaa
tcgacggcctccgaagatttcaagcgggtctcgatcggcaagctcgatgcgctggtcggc
ctcgccgagacggcgcactgccggcgccggcggctgctcgcctatttcggcgagatcgtg
atgggcgagagctgcggcaattgcgacaattgcctgacgccgcccaagatgcgcgacggc
aaggtgctggcgcagaagctgctctcctgcgtctaccgcaccgggcaacgattcggcgcg
atgcatctgatcgacgtgctggtcgggcgcttgactgagaaggtgacgcagttcggccac
gacaagctgtcggtgttcggcatcggccgcgagctcaacgaaaagcagtggcgcaccgtg
ctgcggcagctcgtggcgatgggccatctgcagagcgacagcgaagcctatggtgcgctg
aagctgacggattcctcgcgcggcgtgctgcgcggcgaaaccgaggtgtggctgcgtgag
gaggcgcccggcacccgcgtccgctcgagccgggccaaatcgcgccgcggcgacctcgct
ccggcggcgagcgcgacgccgcaaggcgatgtcgatcctgagctgcgcgcgcggctgcgg
tcctggcgttcagacatcgcccgcgaacgcggcgtgcccgcctatgtcgtgctgcacgat
gccaccatcgacggcatcgtccgggcctggccgacgaccctcgacgaactccgcaacgtc
cccggcatcggcgacaagaagctggagcattacggcgaggagctgctgcagatcgtcagg
acgcggtag
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