Bradyrhizobium sp. CCGE-LA001: BCCGELA001_10540
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Entry
BCCGELA001_10540 CDS
T04273
Name
(GenBank) small-conductance mechanosensitive channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
brc
Bradyrhizobium sp. CCGE-LA001
Brite
KEGG Orthology (KO) [BR:
brc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
brc02000
]
BCCGELA001_10540
Transporters [BR:
brc02000
]
Other transporters
Pores ion channels [TC:
1
]
BCCGELA001_10540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
AMA56649
LinkDB
All DBs
Position
2222907..2225240
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AA seq
777 aa
AA seq
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MSHKLVPALLAALFLAISSLSGARAETPAASSAAALSPDEARRALDTLQDDKKRAQMIDT
LRAIANVSGPQQPAATAPGQKSPIPLAADGLGAQLLLTVSEEIQEISGEIASMARTLTHF
PAFYYWFLRTANDPAAYNLLIEIAWKLALVLGCALAAEWVIFRLIRRPVVFLEGRVPQTA
RLPAQVLPTIDPPSSVADVTPAPELNKRRHSLARVWQVLSRLPFVLGRFVLELLPVVVFV
GVATALLGTEIGQPTTVRLVILAVVNAYAFSRGLICAVRALAGPFGVFPVRAETAAYVEI
WARRIVGVGVSGIAFANVALLLGLHRAGYAALLRMVMLVVHLFVVVIILQCRRQVAEAIR
APAERQGIAARLRNRIAGGWHYPAIALDLALWAVWALNIRNGYSLLLQYFVGTAVVALIT
RVAIMLTLSLIDRGFRIKPEILQRFPGLEIRANRYLPMLRKIVSGVIAFIGFVAVLEVWG
VDAIVWFYGGQIGSRLISAVVTIGLAVAIAAAIWEASNALLDRQINTLSRDGHYARAARL
RTFQPMLRTALLCLIGTVVGLTALSEIGVNVAPLLAGAGIVGIAIGFGSQKLVQDLITGL
FLLLENTVQVGDNVSVSGLSGVVENVSIRTIRLRAGDGAVHIVPFSAVTTITNASRGAGN
ASVSVNVAYKEDTDRAGQILKGIVDEMRSEPDFRALIRGDLELWGVDKVDGAMVSIVGQI
RCTEAGRWPVQREFNRRMKQRFQQNGIQVASATQTILMHVVPPSDSAANLTPRRAAG
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcataagcttgtcccggcgctcctcgccgctctcttcctcgcgatctcatccctc
tccggtgcccgcgccgaaacgccggctgcgagcagcgcggccgcgctgtcgcctgacgag
gccaggcgagcgctcgacacgctccaggacgacaagaaacgcgcgcagatgatcgatacg
ctgcgggcaatcgcgaatgtatccggcccgcagcagccggcagcgaccgcgcccgggcag
aaatcgccgattccgctggcggccgacggcctcggcgcgcaactcctgctcacggtatcg
gaggagattcaggagatatcgggcgagatcgccagcatggcccggacgcttacgcatttt
ccggcgttttattactggttcctgcgcaccgcgaatgatcccgccgcctacaatctcctg
atcgagatcgcctggaagctggcgctggtgctcggttgcgcccttgcggccgagtgggtg
atcttccgcctgatccgccgcccggtcgtattcctcgagggacgcgtgccgcagacggcg
cgcctgccggcacaggtgctgcccacaattgacccgccgtcatcggttgccgacgtcact
ccggcccccgagctgaacaagcgccgtcacagccttgcgcgcgtctggcaggtcctgtcg
cggctgcccttcgtgctgggacgcttcgtgctcgagctgctgccggtggtcgtcttcgtc
ggcgtcgccaccgcgctcctcggcacggagatcggccagcccaccaccgttcgcctcgtg
atcctcgcggtcgtcaacgcctacgcgttctcgcgcggcctgatttgcgcggtccgggcg
ctggcgggaccgttcggcgtgtttcctgtcagggccgagaccgccgcctatgtcgagatc
tgggcgcgccgcatcgtcggcgtcggcgtctccggcatcgcctttgccaatgtagccttg
ctgctcggcttgcaccgcgccggctatgccgcgttgctgcgcatggtaatgctggtcgtg
catctcttcgtcgtcgtcatcatcctgcaatgccgccgccaggtcgccgaagcgatccgc
gcgccggctgagcggcaggggatcgcggcccgcctgcgcaatcgcatcgccggcggctgg
cactatccggccattgcgctcgatctcgcgctgtgggcggtgtgggcgctcaacatccgc
aacggctattcgctgctcttgcaatatttcgtcggcacggccgtggtggcgttgatcacg
cgtgtcgccatcatgctgacgctgagcctcatcgaccgcggcttccgcatcaagccggag
atcctccagcgctttcccggcctcgagatccgggccaaccgctatctgccgatgctgcgc
aagatcgtatcgggcgtgatcgccttcatcggattcgtggccgttctcgaagtctggggc
gtggacgccatcgtctggttctatggcggtcagatcggcagccggctgatctcggccgtg
gtgacgatcggcctcgccgtggccatcgcagccgcgatctgggaggccagcaacgcgctg
ctggaccgccagatcaatacgctatcgcgggacggccactatgcccgcgccgcgcgcctg
cgcacgttccagccgatgctacgcacggcgctgctctgcctaatagggaccgttgtcggc
ctcaccgcgctgagcgagatcggcgtcaatgtcgctccgctgctcgcgggtgccggcatc
gtcggcatcgccatcggcttcggatcgcagaagctggtgcaggacctcatcacgggcctg
ttcctgctgctcgagaacacggtgcaggtcggcgacaatgtcagcgtttcgggattgtcg
ggcgtggtggagaacgtctcgatccgcaccatccgcctgcgtgccggtgatggcgccgtg
cacatcgtgccgttcagcgcggtcacgaccatcaccaatgccagccgcggcgccggcaat
gcctcggtcagcgtcaacgtcgcctacaaggaagacaccgatcgcgccggccagatcctc
aagggcatcgtcgacgagatgcgcagcgagccggatttccgcgcgttgattcgcggcgat
ctcgagctctggggcgtcgacaaggtcgatggcgcgatggtgtcgatcgtcggccagatc
cgctgcaccgaggccggccgctggccggtccagcgcgaattcaaccgccgcatgaagcag
cgcttccagcagaacgggatccaggtcgcatccgcgacgcagacgatcctgatgcatgtc
gtgccaccgtccgacagcgcggccaatctgacgccgcggcgggcggccggatag
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