Bradyrhizobium sp. CCGE-LA001: BCCGELA001_16160
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Entry
BCCGELA001_16160 CDS
T04273
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
brc
Bradyrhizobium sp. CCGE-LA001
Brite
KEGG Orthology (KO) [BR:
brc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brc03016
]
BCCGELA001_16160
Enzymes [BR:
brc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
BCCGELA001_16160
Transfer RNA biogenesis [BR:
brc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
BCCGELA001_16160
Prokaryotic type
BCCGELA001_16160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_3
DAGK_cat
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
AMA57645
UniProt:
A0A0X8CHT6
LinkDB
All DBs
Position
3536258..3537160
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AA seq
300 aa
AA seq
DB search
MFALTFLGTSASVPSVERNHPALLVEAAGKRILVDCGEGTQRQLLRSGAGFRRLDRILLT
HAHLDHVLGIPGLFSTLGLRRTADTMIVHGGQGTLDLVISMLAGLWGAGRAPIAVAFAPL
TEGQVIDAGDFTIDCFPVRHRDTDSFGFAFRSPARRHLFPDRLAALGVPDGPLRGELAAG
RPVVIGDRTINPEEVLGPPSDGSKFVVIGDTETTEGLAQYAADADLLVIEATFLDRDAST
ARDYGHLTARDAAVFAAANNIGQLVLTHQSGRYEDDEVLAEAAAIFPNTRIAADFDRIVV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccctgacatttctcggaacctcggccagcgttccctcggtggagcgcaaccat
ccggcgctgctcgtggaggccgcgggcaagcgtatccttgtcgattgcggcgagggcacc
cagcgccagctgctgcgcagtggcgccggcttccggaggctcgaccgcatcctgctgacg
catgctcatctcgaccacgtgctcggcatccccggcctcttctcgacgctcggcttgcgc
cggaccgccgacacgatgatcgtccatggagggcagggcacgctcgacctcgtcatcagc
atgctcgcgggcctgtggggtgcgggcagggcgccgatcgcagtcgcgttcgcgccgctg
acggaaggacaggtcatcgacgccggcgacttcaccatcgactgctttccggtccgccat
cgcgacaccgacagttttggcttcgccttcaggagtcccgcgcgccgccatctttttccc
gatcgcctcgcagcactcggcgttcccgacggtcccttgcgcggagaattggctgccgga
cgaccggtcgtgatcggtgatcgaacgatcaacccggaagaggtcctggggccaccgagc
gacggcagcaagttcgtcgtgatcggcgacaccgagaccaccgagggtctggcacaatat
gcggctgacgctgatttgctggtgatcgaggcgaccttcctcgatcgcgacgcctcgacc
gcgcgcgactacggccacctcactgcgcgcgatgcagccgtctttgccgcggcaaacaat
atcggccagctcgtgctcacgcatcagtcgggccgctatgaggacgacgaggtccttgcg
gaagcagccgcgatctttccgaacacccggatcgcggccgacttcgatcgcatcgtcgtc
tag
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