Bradyrhizobium sp. CCGE-LA001: BCCGELA001_25385
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Entry
BCCGELA001_25385 CDS
T04273
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
brc
Bradyrhizobium sp. CCGE-LA001
Pathway
brc00061
Fatty acid biosynthesis
brc00071
Fatty acid degradation
brc01100
Metabolic pathways
brc01212
Fatty acid metabolism
brc02024
Quorum sensing
brc04146
Peroxisome
Module
brc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
brc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BCCGELA001_25385
00071 Fatty acid degradation
BCCGELA001_25385
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BCCGELA001_25385
09145 Cellular community - prokaryotes
02024 Quorum sensing
BCCGELA001_25385
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
brc01004
]
BCCGELA001_25385
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brc04147
]
BCCGELA001_25385
Enzymes [BR:
brc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BCCGELA001_25385
Lipid biosynthesis proteins [BR:
brc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BCCGELA001_25385
Exosome [BR:
brc04147
]
Exosomal proteins
Exosomal proteins of breast milk
BCCGELA001_25385
Exosomal proteins of breast cancer cells
BCCGELA001_25385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF764
Motif
Other DBs
NCBI-ProteinID:
AMA59273
UniProt:
A0A120HNQ0
LinkDB
All DBs
Position
5439014..5440945
Genome browser
AA seq
643 aa
AA seq
DB search
MMDYAGRVAQADTYPKMLRLNAREHGSEIALREKDLGLWRIFTWNDYQRRVRDFALGLVE
LGLGRGDVIGIIGDNRPDWVAAEVATHAIGGLSLGLYRDVLDEEASYLLTYGEARLVFAE
DEEQVDKLLALAERVPKLKHIIYSDPRGMRKYDDPRLMSAEKFAELGRARATREPELYDR
LVDATKGEDVAILCTTSGTTSHPKLAMLAAGRVLGHCATYLAFDPKRPNDEYVSVLPLPW
IMEQVYVLGKGLLCRMKINFVEEPDTMMNDLREIAPTFVLFAPRVWESIAADVRAKVMDA
TPFKQRLFDIGMKSGLAALAEGKRSGFADAILFRALRDRLGFTRLRSAATGGAALGPETF
KFFQAMGVPLRTLYGQTELLGAYTLHPEGKVDPDTTGVPMADSVEIRIDNADVHGVGEIV
VRHPNMFLGYYKNPEASVADIKDGWMLSGDAGYFNENRQLVVIDRIKDLAETSRGERFSP
QFIENKLKFSPYIAEAVVLGAGRDALAAMICIRYSIISKWAEKNRLSFTTYSDLASRPEV
YALLRKEVETVNATLPPAQRISRFLLLYKELDADDGELTRTRKVRRSVINEKYAGIIDAI
YRGDADIPVDTVIRFQDGTTQRVRTTLRVVDLGGHGHMAEAAE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatggattatgcaggacgcgtcgcgcaggccgacacctatcccaagatgctccggctc
aacgcccgggagcatggcagcgagatcgcgctgcgcgagaaagatctcgggctctggcgt
atcttcacctggaacgactatcagaggcgggtacgcgatttcgcactcgggctcgtcgag
ctcggtcttggccgcggcgatgtcatcggcatcatcggcgacaaccggccggactgggtc
gcggcggaagtcgcgacacatgcgatcggcggcctcagccttggtctctatcgcgacgta
ctggatgaagaagcctcctatctcctgacatatggggaggcacggctcgtcttcgccgag
gacgaggagcaggtcgacaagctgctcgcgcttgccgagcgcgtgccgaagctgaagcac
atcatctattccgatccgcgcggcatgcggaaatacgacgatcccaggctgatgtcggcg
gagaaattcgccgagctcggccgcgcgcgggccacgcgggagccggagctttacgatcgc
ctcgtggacgcgaccaagggcgaggatgtcgcgatcctttgcacgacgtcaggcacgacg
tctcatcccaagctggcgatgctcgcggccggccgcgtgctcggccattgcgcgacctat
ctcgccttcgacccgaagagacctaacgacgaatatgtctcggtgctgccgctgccctgg
atcatggagcaggtctacgtgctcggcaaaggcctgttgtgccggatgaagatcaacttc
gtcgaagagccggacaccatgatgaacgatctgcgcgagatcgcgccgaccttcgtgctc
tttgctccacgggtctgggaatcgattgccgccgatgtccgcgccaaggtcatggacgcg
acgcccttcaagcaacgcctgttcgacatcggcatgaaatcgggtctggcagcgctcgcg
gaaggcaagcgctccggctttgccgacgccatcctgttccgcgcgctgcgcgaccgcctc
ggtttcacccgcctgcgctcggctgcaaccggcggcgcggcgctcgggcctgagaccttc
aagttcttccaggcgatgggggtgccgctccgcacgctctacggccagaccgagctgctg
ggggcctacacgctgcatcccgagggcaaggtcgatcccgatacgacaggcgtgccgatg
gccgacagcgtcgagatccggatcgacaatgccgatgttcacggcgtcggcgagatcgtg
gtgcggcatcccaacatgttcctcggctactacaagaaccccgaggccagcgtcgccgac
atcaaggacggctggatgttgtcgggcgatgccggctatttcaacgagaaccgccagctc
gtcgtcatcgaccgcatcaaggacctcgccgagacctcgcgcggagagcgcttctcgcca
caattcatcgagaacaagctgaaattctcgccctacatcgccgaggccgtagtactgggc
gccggccgcgacgcgctcgcggccatgatctgcatccgctattccatcatctcgaaatgg
gcggagaagaaccgcctctccttcaccacctacagcgacctcgcctcgcggcccgaggtc
tatgcgctgctccggaaggaggtcgagaccgtcaacgccacgctgccgccggcgcagcgc
atctcgcgcttcctgctgctctacaaggagctcgatgccgacgacggcgagctcacccgc
acccgcaaagtgcgccgcagcgtcatcaacgagaaatacgccgggatcatcgacgcgatc
taccgcggcgatgccgacatccccgtcgacaccgtgatccgcttccaggacggcaccacg
cagcgtgtccgcaccacgttgcgtgtcgtggatctgggcgggcacgggcacatggcggag
gcggccgagtga
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