Bradyrhizobium sp. CCGE-LA001: BCCGELA001_29635
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Entry
BCCGELA001_29635 CDS
T04273
Name
(GenBank) ABC transporter
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
brc
Bradyrhizobium sp. CCGE-LA001
Pathway
brc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
brc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BCCGELA001_29635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
brc02000
]
BCCGELA001_29635
Transporters [BR:
brc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BCCGELA001_29635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AMA59998
LinkDB
All DBs
Position
complement(6465792..6466898)
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AA seq
368 aa
AA seq
DB search
MSFLMKRRRILQTGSSAVLAGAMNSIMGGLSSAATNDLRVVVYGGDIAKAYIEAFVKPFE
TETGIKVVPITDQISFAQLELMVTNKNVTIDVAPITQGATIIGGERGLLEPIDYSSFKRE
ELDGLFDFVRHPYGVGQLIFSYVMVYNVEKYPAGKPRPSTWAEFWDTKTFPGVRTLVSGR
GGGEGPWEEALLADGVPPDKVYPMDINRIFASLDKIKPHIRKWWTVGSEIQQIMTDKAAD
LMQSYSGRTGVVISRGAPMEMNRSQSKIQWDSWVIPKGSPNATKAQKFIEFATRGDRQAA
LARLWPEGPTNRNAFKLLPDELARKLPSYANYLASGIVMNGKWYSERGADGKTNSERLRE
RWNEWILS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagctttttgatgaagcgcagacgtatcctgcaaacgggctcgtccgccgttctagcg
ggagccatgaattcgatcatggggggtctttcgtcggccgccaccaacgacctgcgagtg
gtagtctacggcggtgacatagcaaaggcatacatcgaggcctttgtgaagccgttcgag
acggagaccggaatcaaggtggtcccgattaccgaccaaatcagctttgctcagctcgaa
ctaatggtgaccaacaaaaacgtcacgattgacgttgctcccatcactcagggcgctacc
atcattggtggggagaggggccttctggagccgatcgactattccagttttaagagagag
gagctggatggcctctttgatttcgtcaggcacccctatggggtgggccaactgattttt
tcctacgtcatggtttacaacgtggagaagtatccagcgggcaaaccgcggccgagcaca
tgggctgagttctgggataccaagacatttcctggcgtgcggacgctggtgtcaggtcga
ggagggggtgaggggccttgggaggaagcgctgttggctgatggcgtgcctccggacaaa
gtctatccgatggacataaaccgtatttttgcaagtttggataagataaagccgcacata
cgcaagtggtggacggttggctccgagatccagcagatcatgacagataaggcggccgac
cttatgcaatcctatagcggacgaacgggtgtggtgatttcccggggggctcccatggag
atgaatcggagtcaatctaagatacaatgggatagttgggtgatccctaagggcagtccc
aatgcgacaaaagctcagaagttcattgaatttgctacccgcggcgaccgccaggccgct
ttggcacggctttggccggaaggtccaacaaatcggaacgcatttaagctcctgcccgat
gagcttgcccgtaagcttccgagctatgccaactatttggctagtggcatcgtcatgaac
gggaagtggtacagcgagcgaggggcagacggaaaaacaaactccgagcgcctccgtgaa
cgctggaatgaatggatcctcagctag
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