Brevundimonas sp. DS20: JL11_01190
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Entry
JL11_01190 CDS
T04101
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
brd
Brevundimonas sp. DS20
Pathway
brd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JL11_01190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brd03019
]
JL11_01190
Messenger RNA biogenesis [BR:
brd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JL11_01190
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
ALJ07107
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All DBs
Position
complement(243191..243667)
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AA seq
158 aa
AA seq
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MTDLTLYRPNVGVVLFNGAGQVWYGRRHATPGPYNWQFPQGGVDEGEDLLAAALRELKEE
TGVTSVEFLARTDDWILYDFPPEAMDNPKAWRGFKGQRQQWFAFRFTGQDSEIDLQADEE
VEFDAWRWGDLSEACDLIVPFKRPAYEQVVAAFAHLAT
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacctcaccctctaccgccccaatgtcggggtcgtgctgttcaacggcgcaggc
caggtctggtacggtcgccgtcacgccacccccggcccttataactggcagtttccgcaa
ggcggcgtggatgagggcgaggatctgctggccgccgcactgcgcgagttgaaggaagag
accggcgtgacctcggtggagttcctcgcccggaccgacgactggatcctgtacgacttc
ccgcccgaggcgatggacaatcccaaggcctggcgcggcttcaaggggcagcgccagcag
tggttcgccttccgcttcaccggccaggacagcgagatcgacctgcaggccgacgaggag
gtcgagttcgacgcctggcgctggggcgatctgtccgaggcctgcgacctgatcgtgccg
ttcaaacgcccggcctatgaacaggtggtcgccgccttcgcgcacctggcgacataa
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