Brevundimonas sp. DS20: JL11_01545
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Entry
JL11_01545 CDS
T04101
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
brd
Brevundimonas sp. DS20
Brite
KEGG Orthology (KO) [BR:
brd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brd03400
]
JL11_01545
Enzymes [BR:
brd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JL11_01545
DNA repair and recombination proteins [BR:
brd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JL11_01545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ALJ07165
LinkDB
All DBs
Position
317763..320816
Genome browser
AA seq
1017 aa
AA seq
DB search
MSAFDPFTAAGPRCYAVPAHRPFLEDLAAGVLAWLGDLPPETLSDATLLLPNRRAARAFT
GALSKLSQGRPILLPQVRPLGDLEEDEPPFTPGALGLDLPPAIPALTRRFEMARMIVEQF
DGTLTPMRALDLADALGGFLDSCQLEEVQNPERIATLVDGEMAEHWERSAEFLGLAVEAW
PKRLAELGLVDPAWRRATLLRRLAELWDHTPPTQAVIAAGSTGTVPAAADVLGAVARAPL
GCVVLPGLDLDLDPAVWDRLDEQHPQSAMKRLLDRVEVARADVRPWFAPTQPPAALARRQ
ARQRLVNEALRPAEATDDWRRAIRDLRSTAAARGEARDPIAEGLQGLSLLTVRAEEEAAA
AIALMMRETLETSGKTCALVTPDQALGRRVAARLERWGVIPDSSAGSPLSRLPAGALVDL
CARWIADPVQPHLLLAIVKHPLVRFDLGDAPQAAAVAALEEHALRGPRPRDFAAVRRRLL
EAVQPDRRGKAPPEWKRDRLSAATRLVERLQIAVETATAVFTPEADLNVAASALTRLIET
LASQDAWAGPDGEAAAALLSGLIEGGAALGRIDRADLAELTSSLVRETVVRTGGATHPSL
RILGAIEARLVRADRMILAGLEEGVWPQAAPTDPFLSRPMRKALGLPPPERRLGQTAQDF
VQAACAEEVILVHSERRGGQPAVRSRWLWRLEMLTRGAGVDLPRPSTVLDWTRALDAPPP
GPPRFAKRPEPRPPVHRRPRSLYVTRIERWVRDPYAIYALWVLGLEAMERPGASAEALAR
GNAVHAAVERLTLDWPHDLPDDCETILHDHLLRELGARGFEDAAMAREAPLARNCARWLT
EFERRRRARGIDILVEQQGALTFDAPAGPFTVKAFADRIELSSDGAAVMDFKTGAAPSAK
QVKSGFAPQLTLTAAILADGGFEGAKGPVTPDELTYVRVVGRKTAGEVITRASGAEAADL
AQAALDGLKRLVAKYDNESMPYLSWTAPHSIKNQGGNYDHLARVWEWSVIGDGEDGE
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgttcgatcccttcacggcggccggcccccgctgctacgccgtccccgcccac
cggcccttcctcgaagacctggccgccggcgtcctggcctggctgggcgatctgccgccc
gagaccctgtccgacgccaccctccttctgcccaaccgccgcgccgcccgcgccttcacc
ggcgccctgtcgaaactctcgcagggccgccccatcctgctgccccaggtccggccgctg
ggcgatctggaggaggacgagccccccttcacccccggcgccctcggcctcgacctgccg
cccgccatccccgccctgacccgccggttcgagatggcgcggatgatcgtcgaacagttc
gacggcaccctgacgccgatgcgcgccctggatctggccgatgccctgggcggcttcctc
gattcctgccagctggaagaggtccagaaccccgaacggatcgcgaccctggtcgatggc
gaaatggccgaacactgggaacgctcggccgagttcctgggcctggcggtcgaggcctgg
cccaaacgcctcgccgaactgggcctggtcgatccggcctggcgccgcgccaccctgctg
agacgcctggccgaactgtgggaccacacgcccccgacccaggccgtcatcgccgccggt
tcgaccggcactgtccccgccgccgccgacgtcctgggcgccgtggccagagcgcccctg
ggctgcgtcgtcttgcccggcctcgatctcgatctggatccggcggtctgggaccggctg
gacgaacagcatccgcaaagcgccatgaagcgactgctggaccgggtcgaggtcgcccgc
gccgacgtccgcccctggttcgccccgacccagccccccgccgctctcgcccgccgccag
gcccgccagcgcctggtcaacgaggccctgcgccccgccgaggccaccgacgactggcgc
cgcgcgatccgcgacctccgctcgaccgccgccgcgcgcggcgaggcccgcgaccccata
gccgaaggtctgcaaggcctgtccctgctgaccgtccgcgccgaggaggaggccgccgcg
gccatcgccctgatgatgcgcgagacgctggaaacctccggtaagacctgcgccctggtc
accccggaccaggccctgggccgccgcgtcgccgcccggctggaacgctggggcgtcatc
cccgattcctcggcaggcagccccctgtcgcgcctgcccgccggcgccctggtcgatctg
tgcgcccgctggatcgccgatccggtccagccccatctgctgctggcgatcgtcaaacat
ccgctggtccggttcgacctgggcgacgcccctcaagccgccgccgtcgcggccctggaa
gaacacgccctgcgcggcccccgcccccgcgacttcgccgccgtgcgccgccgtctgctg
gaagccgttcagcccgaccggcgcggcaaggctccgcccgagtggaagcgcgaccgcctt
tcggccgcgacgcgcctggtcgagcgtctgcaaatcgccgtcgagaccgcgaccgccgtc
ttcacccccgaggcggatctgaacgtcgccgcctcggctctgacgcgcctgatcgagacc
ttggccagccaggacgcctgggccggtcccgacggcgaggccgccgccgccctcctgtcc
ggcctgatcgagggcggcgccgccctgggccgcatcgaccgggccgacttggccgagctg
acctcgtccctggtgcgcgagaccgtggtccgcaccgggggcgccacccatccgtctctg
cggattctcggggccatcgaggcccggctggtgcgcgccgaccgaatgatcctggcgggc
ttggaggaaggcgtctggccccaggccgcgcccaccgaccccttcctgtcgcgcccgatg
cgaaaagcgctcggcctgcccccgcccgaacgccgcctgggccagaccgcccaggacttc
gtccaggccgcctgcgccgaggaggtgatcctggtccacagcgaaaggcgcggcggccag
cccgccgtgcgttcgcgctggctgtggcggctggagatgctgacgcggggggcgggagtc
gacctgccccgccccagcacggtcctggactggacccgcgctctggacgcgccgccgccc
ggcccgccgcgcttcgccaaacggcccgagccgcgcccgccggtccatcgccgcccgcgc
agcctctatgtcacccgcatcgaacgctgggtgcgcgacccctacgccatctacgccctg
tgggtgctggggctggaggcgatggagcggcccggcgcctcggccgaagcgctcgcccgc
ggcaacgccgtccacgccgctgtcgaacggctgacgctggactggccccatgacctgccc
gacgactgcgaaaccatcctgcacgaccatctgctgcgtgaactgggcgcgcgcggtttc
gaggatgcggccatggcgcgcgaggcgccgctcgcccgcaactgcgcccgctggctgacc
gagttcgagcgccgccgccgcgcgcgcgggatcgacatcctggtcgagcagcagggtgcc
ctgaccttcgacgcccccgccggccccttcaccgtcaaggccttcgccgaccggatcgaa
ctgtcgtccgacggggcggcggtgatggacttcaagaccggggccgcgccgtccgccaaa
caggtcaagtccggcttcgccccgcaactgaccctgaccgccgccatcctggccgacggc
gggttcgagggcgccaagggcccggtcacgcccgacgaactgacctatgtccgcgtggtc
gggcgcaagacggcgggcgaggtcatcacccgcgcctcgggcgccgaggcggccgacctg
gcccaggcggcgctggacggactgaagcggttggttgccaaatacgacaacgagtccatg
ccctatctttcgtggacagcaccgcactcgatcaaaaaccagggcggcaactacgaccat
ctggcccgcgtctgggaatggtcggtgatcggcgacggcgaggacggcgaatga
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