Brevundimonas sp. DS20: JL11_03685
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Entry
JL11_03685 CDS
T04101
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
brd
Brevundimonas sp. DS20
Brite
KEGG Orthology (KO) [BR:
brd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brd03016
]
JL11_03685
Enzymes [BR:
brd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JL11_03685
Transfer RNA biogenesis [BR:
brd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JL11_03685
Prokaryotic type
JL11_03685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ALJ07538
LinkDB
All DBs
Position
complement(775073..776002)
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AA seq
309 aa
AA seq
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MARKKKGDVVDGWVCLDKPFEMGSTEAVSRIRRLFNAQKAGHAGTLDPLASGILPIALGE
ATKTVPMMMEAQKVYRFTINWGVSTDSVDREGEIIARSDVRPTLEQVKAALFAFVGEIDQ
TPPRFSAIKVDGARAYDLARDGVDFELPSRRVIIHSAEATAAPDADHVEIRILTGKGVYV
RSLARDLALALGAEGHVSALRRERVGPFSTENAVTLDSLEEMVHRGAASEGLLPVATALD
DIPDLAVTEQDAFSLRQGRPIVLLPRQVETLKTRLSDGSRTVSAFQGQTLVALCQLRAGR
LEPDRVFNL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaagaagaagggcgacgtggtcgacggctgggtctgcctggacaagccgttc
gagatgggttcgaccgaggcggtcagccgcatccgccgcctgttcaacgcccagaaggcc
ggtcacgccgggacgctggatcccctggccagcggaatcctgccgatcgccctgggcgag
gcgaccaagaccgtgccgatgatgatggaggcgcagaaggtctatcgcttcaccatcaac
tggggcgtctcgaccgacagcgtggaccgcgagggcgagatcatcgcccgctccgacgtg
cgccccacccttgagcaggtgaaggccgccctgttcgccttcgtcggcgagatcgaccag
acgccgccgcgtttctcggccatcaaggtggacggcgcccgcgcctatgatctggcccgc
gacggggtggatttcgaactgccgtcccggcgggtgatcatccattcggccgaggcgacg
gccgcgccggacgccgatcatgtcgagatccgcatcctgaccggcaagggcgtctatgtc
cgttccctggcccgcgacctggccctggccctgggcgccgagggtcatgtgtcggccctg
cggcgcgagcgggtcgggcccttcagcacggaaaacgccgtcactctggattctctggag
gaaatggtgcataggggcgccgcctcggaaggcttgcttcccgtcgcgaccgctctggac
gacatcccggatctggccgtgacggaacaggacgccttctcgcttcggcagggacgcccg
atcgttctgctcccccgtcaggtggaaaccctcaagacccgtctgtcggacggctcgcga
acggtttcagccttccagggccagaccctcgtcgcactctgtcaattgcgggccggccgg
ttagaacccgaccgcgttttcaacctctag
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