Brevundimonas sp. DS20: JL11_12135
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Entry
JL11_12135 CDS
T04101
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
brd
Brevundimonas sp. DS20
Pathway
brd03420
Nucleotide excision repair
brd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JL11_12135
03430 Mismatch repair
JL11_12135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brd03400
]
JL11_12135
Enzymes [BR:
brd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JL11_12135
DNA repair and recombination proteins [BR:
brd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JL11_12135
MMR (mismatch excision repair)
Other MMR factors
JL11_12135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_11
DUF3553
Metallophos_C
PcrA_UvrD_tudor
Agd3_CE
Motif
Other DBs
NCBI-ProteinID:
ALJ09004
UniProt:
A0A0N7HZU0
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All DBs
Position
2480771..2483128
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AA seq
785 aa
AA seq
DB search
MTDLPAPRISDLARARAPQEGEARDYLSGLNPEQREAVETTEGPVLVLAGAGTGKTRVLT
TRLAHILATGRARPWELLAVTFTNKAAREMRERITHLIGPSAEGLRWLGTFHSIAAQILR
RHAELVGLKSSFTILDTDDQERLLKQLLEAANIDTKRWTPKSLAGLIDHWKNRGWTPDKL
PPGEDFANGKGQGLYAAYQARLRTLNACDFGDLLLHNITILSKHADLAEEYRRRFRYILV
DEYQDTNVAQYLWLRLLTASTGNVCCVGDDDQSIYGWRGAEVDNILRFERDFPGAKIVKL
ERNYRSTSHILGAASGLIAANRDRLGKTLWTEDDSGDKVRVRGVWDGEAEARLIADEIET
ARRPHAGKPGLKYKDMAILVRASFQMRAFEERLVMLAIPYQVIGGPRFFERAEIRDAHAY
LRLIQSEDDDLAFERIVNVPKRGIGDTSVQKILQIARQHDLSALTAVRGLINTDELQART
RTALSNFVRDLDRWRALAETTPHWQVMETVLEESGYTEMQKADRTSGQTRLENLKELTQS
MQQFETLQAYLEHVSLVMDLERATAEDPHGDGAVQIMTLHGAKGLEFPLVFLPGWEEGVF
PSQRSIDEKGEKGLEEERRLAYVGVTRAKQDARISFAANRLVYGRWTSQLPSRFVDELPI
AHVDPQSDTGYYGASTGMKEAKSRWDDAPSFGSGYSSPGWKRAQSFTAAQTPNRIPARKA
VIEGDGRLIATADPKSSSGWARGQRVFHQKFGYGHVRVIEGNKLLVDFEKAGEKRVIDSF
VEKAD
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatcttcccgccccccgtatttcagacctggcccgcgcgcgtgcgccgcaggag
ggagaggcgcgcgactatctgtctggactgaaccccgagcagcgcgaggcggtcgagacg
acggaaggcccggtcctggtcctggcgggcgccggcacgggcaagacgcgggtgctgacg
acgcgactggcccacatcctggccaccggccgcgcccgcccgtgggagcttctggccgtc
accttcaccaacaaggccgcgcgcgaaatgcgcgaacggatcacccatctgatcggcccc
tccgccgaaggcctgcgctggctgggcaccttccactccatcgccgcccagatcctgcgc
cgccacgccgaactggtcgggctgaagtccagcttcaccatcctggacaccgacgaccag
gagcggctgctgaaacagctgctggaagccgccaatatcgacaccaagcgctggacgccc
aaatccctggccggcctgatcgaccactggaagaaccgcggctggacgcccgacaaactg
ccgcccggcgaagacttcgccaacggcaagggccagggtctttacgccgcctatcaggcc
cgcctgcgcaccctgaacgcctgcgacttcggcgatctgctgctgcacaacatcaccatc
ctgtccaagcacgcggacctggccgaggaataccggcgacgcttccgctacattctggtc
gacgaatatcaggacaccaacgtcgcccagtatctgtggctgcggctgctgacggcctcg
accggcaatgtctgctgcgtcggcgacgacgaccagtcgatctacggctggcgcggggcc
gaggtggacaacatcctgcgcttcgagcgcgacttccccggcgccaagatcgtcaagctg
gagcgcaactatcgctcgaccagccatatcctgggcgccgcctcgggcctgatcgcggcc
aaccgcgaccgtctgggcaagaccctgtggaccgaggacgacagcggcgacaaggtgcgg
gtgcgcggcgtctgggacggcgaggccgaggcccgtctgatcgccgatgagatcgagacc
gcgcgtcgcccccacgccggcaagccggggctgaaatacaaggacatggccatactggtc
cgcgcctccttccagatgcgcgccttcgaggagcggctggtcatgctggccatcccctac
caggtcatcggcggcccccgcttcttcgaacgcgccgaaatccgcgacgcccacgcctat
ctgcgcctgatccagtccgaggacgacgacctggccttcgagcggatcgtcaacgtcccc
aagcgcggcatcggcgacaccagcgtccagaagatcctgcagatcgcccgccagcacgac
ctgtccgccctgacggccgtgcgaggcctgatcaacaccgacgagcttcaggcccgcacc
cgcaccgccctgtccaacttcgtgcgcgacctggaccgctggcgcgccctggccgagacc
acgcctcactggcaggtcatggagacggtgctggaggagagcggctacaccgagatgcag
aaggccgaccgcaccagcggccagacgcggctggagaacctgaaggaactgacccagtcc
atgcagcagttcgagacgctgcaggcctatctggagcatgtctccctggtcatggacctg
gaacgggcgacggccgaggacccgcacggcgacggggcggtccagatcatgaccctgcac
ggcgccaagggacttgagttcccgctggtcttcctgcccggctgggaggaaggcgtcttc
cccagccagcgcagcatcgacgaaaagggcgagaagggcctcgaggaggaacgccgcctg
gcctatgtcggcgtcacccgcgccaaacaggacgcccgcatctccttcgccgccaaccgc
ctggtctatggccgctggacctcgcaactgcccagccgcttcgtcgacgaactgcccatc
gcccacgtcgatccccaatccgacaccggctactacggcgcctcgaccggcatgaaggag
gccaagagccgctgggacgacgcgcccagcttcggcagcggctattcctcccccggttgg
aaacgggcccaaagcttcaccgccgcacagacgccgaaccgcatccccgcgcgcaaggcc
gtgatcgagggcgacggccgcctgatcgccacggcggacccgaagtccagctcaggatgg
gcgcgcggccagcgcgtcttccaccagaagttcggctacggccacgtccgcgtcatagag
ggcaacaagctgctggtcgatttcgaaaaggcgggcgagaaacgggtgatcgacagtttc
gtggagaaggcggactga
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