Brevundimonas sp. DS20: JL11_14215
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Entry
JL11_14215 CDS
T04101
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
brd
Brevundimonas sp. DS20
Brite
KEGG Orthology (KO) [BR:
brd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brd03032
]
JL11_14215
03400 DNA repair and recombination proteins [BR:
brd03400
]
JL11_14215
Enzymes [BR:
brd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JL11_14215
DNA replication proteins [BR:
brd03032
]
Prokaryotic type
DNA Topoisomerases
JL11_14215
DNA repair and recombination proteins [BR:
brd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JL11_14215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
PB1
Motif
Other DBs
NCBI-ProteinID:
ALJ09358
LinkDB
All DBs
Position
2902155..2903177
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AA seq
340 aa
AA seq
DB search
MADGSHGFDPVVEVPQGLSWCSDDNPGLTRRRAGKGWSYRDAEGRPVKDPKVLDRIRALA
IPPAWTDVWICPKANGHIQATGRDLKGRKQYRYHNDWSTARSENKFDKLPAFSRALPRLR
AQVEHDLGLRGPVKEKVLATAVRLLEITLIRVGNATYARQNRSYGLTTLNKRHLEVDGAA
LTFEFRGKSGKDHRVSVRDRRLARVVRTLEELPGRQLFKYRDAEGHLCPVTSDDVNAYIR
AAMGEQFSAKDFRTWAGTVSAARALREMEPPTSPTDAKRKITVCVKAVAGLLGNTPTVCR
TAYVHPKVMALFESGALKTALPGPDAKGFETALIRLLKTS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggatcgcatggcttcgacccggtggtcgaggttccgcaggggctgagctgg
tgcagcgacgacaaccccggcctgacccgccgccgcgccggcaagggctggtcctatcgc
gacgccgaggggcggccggtcaaggaccccaaggttctggaccggatccgcgccctggcc
attccgcccgcctggaccgacgtctggatctgccccaaggccaacggccatatccaggcc
acgggccgggacctgaagggccgcaaacagtaccgttatcacaacgattggagcacggcc
cggtcggagaacaagttcgacaagctgccggccttctcacgcgccctgccccggctgcgc
gcccaggtggagcatgatctggggctgcggggaccggtgaaggagaaggtgctggcgacc
gccgtgcgtctgctggagatcaccctgatccgggtcggcaatgcgacctacgcccgtcag
aaccgcagctatggactgaccaccctgaacaagcggcatctggaggtggacggcgccgcc
ctgacgttcgagttccgcggcaagagcggcaaggaccaccgggtcagcgtccgcgaccgg
cggctggcgcgggtggtccggaccctggaggagctgccggggcgccaattgttcaaatac
cgcgacgccgagggccatctgtgccccgtcacctcggacgatgtgaacgcctatatccgc
gcggccatgggtgagcagttctcggccaaggacttccgcacctgggcgggcacggtctcg
gcggcgcgggccctgcgcgagatggagcccccgacatcgcccaccgacgcgaaacgcaag
atcaccgtctgcgtcaaggcggtggcgggcctgttgggcaatacgccgacggtgtgccgg
accgcctatgtccatccgaaggtgatggccctgttcgagagcggcgcgttgaagaccgcc
ctgccgggaccggacgccaaggggttcgagaccgcgctgatccggctgctgaagacgagt
tga
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