Brevundimonas sp. DS20: JL11_16135
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Entry
JL11_16135 CDS
T04101
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
brd
Brevundimonas sp. DS20
Pathway
brd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JL11_16135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brd03000
]
JL11_16135
03400 DNA repair and recombination proteins [BR:
brd03400
]
JL11_16135
Enzymes [BR:
brd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
JL11_16135
Transcription factors [BR:
brd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
JL11_16135
DNA repair and recombination proteins [BR:
brd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JL11_16135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
HTH_18
AlkA_N
HTH_AraC
HHH
Motif
Other DBs
NCBI-ProteinID:
ALJ09693
LinkDB
All DBs
Position
complement(3287513..3288595)
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AA seq
360 aa
AA seq
DB search
MEQTLDSEACWRALSARDARFDGRFFTGVTSTGIYCRPVCPARTPRRENVVFHPTAASAE
AAGFRACLRCRPETAPEMGAWRGTSNTVSRALALIEAGALDDGDAEALAERLGVGERHLR
RLFRQHLGAAPVSVAQTRRVLLAKQLIHETELTMAEVAMASGFGSVRRFNETFQALYGRP
PSALRRRKAAEEGGGRVTLNLAYRPPYDWDFVSAALAARGAADETTADGAWTRRLRKSVD
GTEGAVTVRSGALGKAVVEARIDELKALPGVLARVRRVFDLAADPEAITRDLSADPELAP
VLAARPGLRPVGDWIDDGEGAPSDRLTGADAALTARAERWRPWRAYGALYWNTIKEMSHD
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaccctggattcggaagcctgctggcgggcgctgagcgcccgcgacgcccgg
ttcgacgggcggttcttcacgggggtcacctcgaccggcatctactgtcggccggtctgt
ccggcgcggacgccgcggcgagagaatgtggtgttccacccgactgcggcctcggccgag
gcggcggggtttcgcgcctgtctgcgctgtcggcccgagacggcgccggagatgggcgcc
tggcgcggcacgtccaacaccgtcagccgcgccctggctctgatcgaggcgggcgcgctg
gacgacggggacgccgaggccctggccgagcggctgggggtgggagagcggcacctgcgg
cggctgtttcgccagcatctgggcgccgcccccgtcagcgtggcccagacccggcgggtg
cttctggccaaacagctgatccatgagaccgaactgaccatggccgaggtggcgatggcg
tcgggcttcggcagcgtgcgccggttcaatgaaaccttccaggccctgtacgggcgcccg
ccctcggccctgcggcggcgcaaggcggcggaggagggcggcgggcgcgtgaccctgaac
ctggcctatcgcccgccctatgactgggacttcgtgtcggcggccttggcggcgcgtggg
gcggccgatgaaaccacggcggacggcgcctggacgcggcggctgcgcaagtcggtggat
gggaccgagggcgcagtgacggtgcgctccggcgcgctcggcaaggctgtggtcgaggcc
cgcatcgacgagttgaaggccctgcccggcgtcctggcgcgggtgcggcgcgtgttcgac
ttggcggccgatccggaggcgatcacgcgcgacctgtccgctgaccccgaactggcgccg
gtcctggccgcgcggccgggtctgcgtcccgtcggcgactggatcgacgacggagagggc
gcgcccagcgatcggctgaccggcgccgacgccgccctgacggcgcgggccgagcggtgg
cggccgtggcgcgcctatggagccctgtattggaacacgatcaaggagatgagccatgac
tga
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