Brevundimonas sp. AJA228-03: HZ989_00150
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Entry
HZ989_00150 CDS
T09566
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
brea
Brevundimonas sp. AJA228-03
Brite
KEGG Orthology (KO) [BR:
brea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brea03400
]
HZ989_00150 (addA)
Enzymes [BR:
brea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HZ989_00150 (addA)
DNA repair and recombination proteins [BR:
brea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HZ989_00150 (addA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QTN19544
LinkDB
All DBs
Position
complement(27818..31348)
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AA seq
1176 aa
AA seq
DB search
MSVPHSDVRANDAQRKAADPDLSVFVTANAGSGKTTTLVDRVARLLLAGVGPGEILCVTY
TKAAAAEMQARLFEKLGDWAVADDRVLAGELAKLDGRDPAALSGADLSVARKLFAQALET
PGGLKIQTIHAFCEKLLRRFPLEAGVSPRFTVLENEAARVLSHEARQALARVAHDDPDGP
VAEAYSHFAVELDWGAFQNLLAMIESERLKLTAYIDRWEAGEAPGPHVLALADPDRTPGE
IEAEFLRFVDPVRWTVTADAMATGSKTDQDCAARMRAVAYPDWTFAGLGPVFLTGSGTPR
ASMGTKQAPPAAVAWLVDMQAKYTATQGALRAARVADDTVKVLTLAGAHAALYEAAKRAR
GALDFSDLVDRTRALLTEAGAAAWVLFKLDGGIEHVLIDEAQDTAPDQWDIVRALTGEFF
SGDGAPRRGSEPKIPRTVFAVGDQKQSIYSFQGARPERLLEEAQYFERLTRGAGRTFQAV
PLATSFRSTPEVLEFVDAAFFDVEAQVTPERARALVGETGEIARHTAIRQGQAGCVDLWP
VFVDPPKVEREAWTQPVDLESEVSGRKRLARALAADIRRQVEAGVGVHDKKDGVLRPCHY
GDFLVLVRRRDATFEEIIRALKTAGVPVAGADRLKLSSHIVFDDLIAVARFALYPDDDLS
LAEVLRSPFCDVPDFGPADSLYELAGADPKRPGLWRTLCDRAGEHPAWARARAFLQFAIE
ARDRDPFAFFAGVLNRVDETGRSGRARVLARLGAEAAEALDETLAQVLSAEERGGSDLET
CVSLLEAADVEVKREMEGARAEVRVMTVHGAKGLEAPIVILPDTTQRATPQGPGLMPVAL
PDGSEAWLMCPGRKEDDCEASSLARAARVQRTDEETLRLLYVALTRARDRIVVMGRRSAT
REPEARSWWDVICETFGRLEDRGQVEAVIQPGVSEPIRRFGAHPVAVERGAGEAEVAATV
VPDWARAMPPVDPSARYVSPSQAKAVKRVSAPSPLAVAGADGGVSLGRFRRGDLIHRLLE
RLPEIEPAARPDAARRMLARERDLSDDQRDEMIAAAFAVLEDARFSAVFGAGSRAEVALT
GSAPGLPAGVSISGRIDRLVVTPDRVLVVDYKTNRPAPDRIEDADPAYVAQMAVYVAVLK
RLYPDRPVEAALVWTDGPKLMAVPQGMMDEALAGLR
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcctcattcagacgtccgcgcgaacgacgctcagaggaaggcggccgatccc
gacctgtcggtcttcgtcaccgccaatgccggatcgggcaagaccacgaccctggtcgac
cgggtggcgcgattgctgctggccggcgtcgggccgggcgagatcctgtgcgtgacctat
accaaggcggcggcggccgagatgcaggcccgcctgttcgagaagctgggcgactgggcg
gtggccgacgaccgggtgctggccggcgaactggccaagctggacgggcgcgatccggcg
gcgttgtcgggggccgatctgtcggtggcgcgaaagctgttcgcccaggcgctggagacg
ccgggcgggctgaagatccagaccatccacgccttctgcgagaagctgttgcgccggttt
ccgctggaggccggggtgtcgccgcgcttcaccgtgctggagaacgaggcggcgcgcgtc
ctgtcgcacgaggcgcgacaggcattggcgcgggtggcgcacgacgatccggacgggccg
gtggccgaggcctattcccatttcgcggtcgagctggactggggggcgttccagaacctg
ctggccatgatcgagagcgagcggttgaagctgaccgcctatatcgaccgttgggaagcg
ggagaggccccggggccgcacgttctggcattggccgatccggaccggacgccgggcgag
atcgaggcggaatttctgcgtttcgtcgatccggtgcgctggaccgtgacggccgatgcg
atggcgacggggtcgaagacggatcaggattgcgccgcgcggatgcgggcggtggcgtat
ccggactggaccttcgccgggctggggccggtgttcctgacgggatcgggcacgccgcgc
gcgtccatgggaacgaagcaggccccgccggccgccgtggcctggctggtggacatgcag
gcgaaatatacggccacccagggggcgttgcgggccgcgcgggtggcggacgatacggtc
aaggtgctgaccctggccggggcgcatgcggcgctctacgaggcggcgaagcgagccagg
ggcgcgctggatttttcggacctggtcgaccggacgcgggcgctgctgaccgaggcgggg
gccgcggcctgggtgctgttcaagctggacggcggcatcgagcatgtcctgatcgacgag
gcccaggacactgcgccggaccagtgggacatcgtccgtgccctgacgggagaattcttc
tccggcgacggcgcgccccggcggggatcggagccgaagatcccgcgcaccgtgttcgca
gtgggcgaccagaagcagtcgatctattccttccagggggcgcggcccgaacggctgctg
gaggaggcccagtatttcgaacggctgacgcgcggggccgggcggacgtttcaggcggtg
ccgctggcgacatccttccggtcgacgccggaggtgctggaattcgtcgatgcggccttc
ttcgatgtcgaggcccaggtgaccccggagcgggcgcgggccctggtcggggaaacgggc
gagatcgcgcggcatacggcgatccggcaggggcaggcgggttgcgtggatctgtggccc
gtcttcgtcgatccgccaaaggtcgagcgcgaggcctggacccagccggtcgatctggag
agcgaggtcagtggacgaaagcggctggcgcgggcgctggcggcggacatcaggcgtcag
gtcgaggcgggcgtcggcgtccatgacaagaaggacggggtcctgcggccctgccactat
ggtgacttcctggtgctggtgcgccggcgggacgcgacgttcgaggagatcatccgggcg
ctgaagactgcgggcgtgcccgtggccggggcggaccggctgaagctgtccagccatatc
gtgttcgatgacctgatcgcggtggcgcggttcgccctgtacccggacgacgacctgagc
cttgccgaggtgctgcgcagcccgttctgcgatgtgccggacttcgggcccgccgacagt
ctttatgaactcgccggtgccgatccgaagcgcccgggcctgtggcgcacgctgtgcgac
cgggcgggcgaacatccggcctgggcgcgggcaagggcctttctgcaattcgcgatcgag
gcgcgggaccgcgatccgttcgccttcttcgccggggtgctgaaccgggtggacgagacc
gggcggtcggggcgggcgcgggtgctggcgcggctgggggccgaggccgccgaggcgctg
gacgagaccctggcccaggtgctgtcggccgaggaacggggcgggtcggatctggagacc
tgcgtatccctgctggaagcggcggacgtggaggtcaagcgcgagatggagggcgcgcgg
gcggaggtgcgggtcatgaccgtgcacggggccaaggggctggaggcaccgatcgtgatc
ctgccggacacgacccagcgggccacgccgcaagggcccggtctgatgccggtcgccctg
ccggacggatcggaggcctggctgatgtgtccggggcgcaaggaggacgactgcgaggcc
tcgagcctggcgcgggcggcacgggtccagcggacggacgaggagacgctgcggctgctc
tatgtcgccctgacgcgggcgcgcgaccggatcgtggtcatggggcggcgctcggcgacg
cgcgagccggaggcgcgcagctggtgggacgtgatctgcgagaccttcgggcggctggag
gaccggggccaggtcgaggcggtgatccagccgggcgtttccgagccgatccgccggttc
ggggcccatccggtggcggtcgagcggggggcgggcgaggcggaggtggccgcgacggtc
gtgccggactgggcgcgggcgatgccaccggtcgatccgtcggcccgctatgtctcgccg
tcgcaggcgaaggcggtcaaacgggtgtcggccccctcgccgctggcggtcgcgggggcg
gatgggggcgtatcgctgggccggttccggcgcggcgacctgatccaccggctactggag
cggctgcccgagatcgaaccggcggcacgtccggacgcggcgcggcggatgctggcgcgc
gagcgggacctgtcggacgatcagcgcgacgagatgatcgcggctgcgttcgcggtgctg
gaggacgcccggttctcggccgtgttcggggccggatcgcgggcggaggtggcgctgacc
gggtcggcaccggggctgccggcgggcgtgtcgatcagtggccggatcgaccggctggtg
gtgacgcccgatcgggtcctggtcgtcgactacaagaccaaccgccccgccccggaccgg
atcgaggacgccgaccccgcctatgtggcccagatggcggtctatgtggcggtgctgaag
cggctgtatccggatcgcccggtcgaggcggccctggtgtggacggacgggccgaagctg
atggccgtgccgcaggggatgatggatgaggcgttggcgggactgcgttga
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