Brevundimonas sp. AJA228-03: HZ989_00155
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Entry
HZ989_00155 CDS
T09566
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
brea
Brevundimonas sp. AJA228-03
Brite
KEGG Orthology (KO) [BR:
brea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brea03400
]
HZ989_00155 (addB)
Enzymes [BR:
brea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HZ989_00155 (addB)
DNA repair and recombination proteins [BR:
brea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HZ989_00155 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
P5CR_dimer
Motif
Other DBs
NCBI-ProteinID:
QTN19545
LinkDB
All DBs
Position
complement(31345..34422)
Genome browser
AA seq
1025 aa
AA seq
DB search
MTAFDPFAGDTPRWFAIPAHRPFLDDLAAGVLDWLGDHPPEALSDATLLLPNRRAARAFG
AALATQAGDRPVLLPQARPLGDLEEDEPPFSPGELGLDLPPAIAPLTRRFEMARMIVEEF
ASGMPPMRALELADSLGAFLDSCHIEEVVEPERVAALAPEDMAEHWQASATFLGLAVHAW
PKRLEVMGLVDASWRRTKLLRMLAARWDSHPPQGPVIAAGSTGTVKAAAAVLAAVAKAPM
GCVVLPGLDADLDAAAWAAIDEPHPQSALKRLLDDHGVERGAVRPWFRRPIEARVEARGL
ARQRLIHEALRPADATADWRTEISRLRAEAAAAGQAADPIAAGLEGLSVVSARTEEEAAG
AIALMMRETLDVPGRTCALVTPDLALGRRVAARLERWGVTADTSSGATLDRMPVGVLVDL
CARWMAGPMVPQTVLAVLKHELTTLAEATGEAVRTLEKVAFRGAAAEAWKRVARRLDEAA
LPRRDGKVASEALLARLGTARVLADRLETVSGTATEAFGPEASLDAAARSLTGLVETLAG
VDVWSGPDGEAAASLLSQLIEAGASLGAVSADDFAEMVRSLLRQQTVRTGGATHPSLRIL
GAIEARLVRADRMILAGLEEGVWPGPAPTDPFLSRPMRTALGLPSPERRVGQTAQDFVQA
ACAPEAILVHTERRGGQPAVRSRWLWRLEMLTRGANSKDTRVEIERRSPALEVARVLDAP
ADPRPAYARRPAPTPPVDRRPRELPVTGVERWVRDPYAVYAQRILGLRVMDRPGAAAEAM
ARGDAVHASLQRVFETWPAEIPDDCAVEIERFLHEAMTDRGFDAAAMARERPLARNSARW
LADFERQRRARGATLLIEVEGRMTVPSVGGAFLVTARADRIELDADGAAVIDFKTGDHAK
SKVVRAGFAPQLTLTAAILANGGFAPHAPPTDASELIYVKIVGRKEPGKVTDISVPTKND
PAGAAEMAEAALEGLNRRIAAFDNPDTPYVSWAAPQFMGNFGGNYDHLARLWEWHVAGAD
EEADA
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccttcgatccctttgccggcgacacgccgcgctggttcgcgatccccgcgcat
cggcccttcctcgacgatctggcggcgggcgtgctggactggctgggggaccatccgccg
gaggccctgtcggacgcgaccctcctgctgcccaaccggcgcgcggcgcgggcgttcggg
gcggcgttggccactcaagcgggtgaccggccggtgctgctgccccaggcgcggccgctg
ggcgatctggaggaggacgagccgccgttctcgccgggggaactgggtctggacctgccg
ccggccatcgcgcccctgacgcgccggttcgagatggcgcggatgatcgtggaggagttc
gcgtcgggcatgccgccgatgcgggcgctggagctggccgacagcctgggagccttcctc
gattcctgccacatcgaggaggtggtcgagcccgaacgggtcgccgccctggcccccgag
gacatggccgaacactggcaggcgtcggcgaccttcctggggctggcggtccatgcctgg
cccaagcggctggaggtgatggggctggtcgatgcgtcctggcgacggacgaagctgctg
cggatgctggccgcgcgatgggacagccatccgccacaggggcccgtgatcgcggccgga
tcgacgggcacggtcaaggcggcggcggccgtgctggcagcggtggcgaaggctcccatg
ggatgtgtcgtcctgccggggctggacgccgatctggacgcggcggcctgggcagcgatc
gacgaaccgcatccgcagagcgcattgaagcggctgctggacgatcacggggtcgagcgg
ggcgcggtgcggccctggttccggcggccgatagaggcgcgggtggaggccaggggcctg
gcccgtcagcggctgatccacgaggcgctgcgacccgcggatgcgacggcggactggcgc
accgagatttcgcggctgcgggccgaggcggcggcggcggggcaggcggccgatccgatt
gcggcggggctggaaggtctgtcggtcgtttcggcgcggacggaggaggaggccgccggg
gccatcgccctgatgatgcgcgagacgctggacgtccccgggcggacctgcgcccttgtc
acgccggatctggcgctggggcggcgggtcgcggcgcggctggagcggtggggggtgacg
gcggacacttcgtccggcgcgaccctggaccggatgccggtcggggtgctggtcgatctg
tgcgcccgctggatggccgggccgatggtgccgcagacggtgctggcggtgctgaagcat
gagctgacgaccctggccgaggcgacgggtgaggccgtgcggacgctggagaaggtcgcc
ttccggggcgcagcggcggaggcctggaagcgggtcgcgcggcggctggacgaggcggcc
ctgccccggcgggacggcaaggtggcgtcggaggccttgctggcgcggctgggcacggcg
cgggtgctggcggatcggctggagacggtgagcgggacggcgaccgaggcctttggaccg
gaggcgtcgctggacgcggcggcgcggagcctgaccgggctggtcgagaccctggcgggg
gtcgacgtctggtccgggccggacggcgaggcggcggcgtcgctgctgtcgcagctgatc
gaggccggggcatcgctgggggcggtatcggccgacgacttcgcggaaatggtccgaagc
ctgttacgccagcagacggtgcggaccggcggggcgacccatccgtcgctgcgcatcctg
ggggcgatcgaggcgcggctggtgcgggccgaccggatgatcctggcggggctggaggag
ggcgtctggccgggaccggcgccgaccgatcccttcctgtcgcgaccgatgcggacggcc
ctgggcctgccctcgcccgagcggcgggtcgggcagacggcacaggatttcgtccaggcg
gcctgcgcgcccgaggccatcctggtccacaccgagcggcgtggcgggcagccggcggtc
cgctcgcgctggctgtggcggctggagatgctgaccaggggggccaattccaaagacacg
cgcgtcgagatcgagcggcggagtccggcgctggaggtcgcgcgggtgctggacgctccg
gccgatccgcgtccggcctatgcccgacgccccgcaccgacgccgccggtggatcggcgg
ccgcgagagctgccggtcacgggcgtggagcgatgggtgcgcgatccttatgcggtctat
gcccagcggatcctcggcctgcgggtcatggaccggccgggggccgcggccgaggcgatg
gcgcggggcgatgcggtacacgcgtccctgcagcgggtgttcgagacctggccggccgaa
atcccggacgactgcgccgtcgagatcgagcgtttcctgcacgaggccatgaccgatcgc
ggcttcgatgcggcagcgatggcgcgcgagcggccgctggcgcgaaacagcgcgcgctgg
ctggcggatttcgagcggcaaaggcgggcgcggggcgcgaccctgctgatcgaggtggaa
ggccggatgaccgtgccgtccgtgggcggagcgttcttggtgacggcgcgggccgaccgg
atcgagctggacgccgacggtgccgcggtgatcgacttcaagactggagaccatgccaag
tcgaaagtggttcgcgcgggctttgcccctcagttgacccttacggcagcaatcttggcc
aatggtggatttgcgccgcacgctccgcccaccgacgcgtccgaactcatttatgtgaag
atcgtcggtcgaaaagagccaggaaaggtcacggacatctcggtgccgacgaaaaatgac
ccggcgggcgcggcagagatggcggaggcggccctggagggcctgaatcgccggatcgcc
gcgttcgacaaccccgacaccccctatgtcagctgggcggccccgcagttcatgggcaat
ttcggcggcaactacgaccatcttgcgcgtctttgggaatggcatgtcgccggcgcggac
gaggaggccgacgcatga
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