Brevundimonas sp. AJA228-03: HZ989_01320
Help
Entry
HZ989_01320 CDS
T09566
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
brea
Brevundimonas sp. AJA228-03
Pathway
brea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HZ989_01320 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brea03019
]
HZ989_01320 (pnp)
03016 Transfer RNA biogenesis [BR:
brea03016
]
HZ989_01320 (pnp)
Enzymes [BR:
brea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HZ989_01320 (pnp)
Messenger RNA biogenesis [BR:
brea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HZ989_01320 (pnp)
Transfer RNA biogenesis [BR:
brea03016
]
Prokaryotic type
tRNA degradation factors
HZ989_01320 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QTN19750
LinkDB
All DBs
Position
246411..248657
Genome browser
AA seq
748 aa
AA seq
DB search
MFDIKRKTIDWAGRPLTLETGRIARQADGAVLATYGETVVLATVVYGRAPKPGLDFFPLT
VNYQEKTFAAGKIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVKGFKNETQVVITVLQH
DLENDPDIVGMVATSAALTLSGVPFMGPIGAARVGYIDGEFVLNPTLDQMPDSALDLVVA
GTSDALMMVESEARELSEQVMLDALMFAHRGMQPVIDAIIEMAEHAAKDPFDFTAEDHSD
VVTRIQSLVGEDIKAAYTHVGKHARHEAVGAAKKKASAALVKTDEHPDGVDSATFGTAFK
ECEAHVLRRDIIDNAHRVDGRALDKVRDIVSEVGIFPRTHGSALFTRGETQAIVVATLGT
GEDEQYVDSLAGTYKEKFLLHYNFPPYSVGETGRMGGAGRREIGHGKLAWRAIRPMLPTS
EEFPYTIRIVSEITESNGSSSMASVCGASLALMDAGVPLKKPVSGIAMGLILEPSGEFAI
LSDILGDEDHLGDMDFKVAGTRDGITSLQMDIKVAGITEEIMKKAIAQASAGRLHILDEM
DKAIDGARTELGEYAPKIESIKVPVDKIRDIIGTGGKIIREIVEKTGAKINIEDDGTVKI
AASDQEKIDAAKNWISSIVSEPEPGMIYSGKVVKVVDFGAFVNFFGAKDGLVHVSQIALE
RVANPADVLSEGQEVKVKFLGFDDRGKTKLSMKVVDQSTGEDLTDKINAERAERGEPPLT
EDTGGGGKKREGGGDRGGDRGRGRSRRD
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatcaaacgcaagacgatcgactgggcgggccgcccgctgacgctggaaacg
ggccgcatcgcccgacaggccgacggtgccgtcctggccacctatggcgagaccgtcgtc
ctggccaccgtcgtctacggtcgcgcgcccaagccgggcctggatttcttcccgctgacc
gtcaactaccaggaaaagaccttcgccgccggcaagatccccggtggctatttcaagcgt
gaaggccgcccgaccgagaaggaaaccctggtcagccgcctgatcgaccgtccgatccgc
ccgctgttcgtcaagggcttcaagaacgagacccaggtcgtcatcaccgtgctgcagcac
gatctggagaacgaccccgacatcgtcggcatggtcgccacctctgcggccctgaccctg
tcgggcgtgcctttcatgggcccgatcggcgccgcccgcgtcggctatatcgacggcgag
ttcgtgctgaacccgaccctggaccagatgcctgactccgcgctcgacctggtcgtcgcc
ggcacctctgacgccctgatgatggtcgaatccgaagccagggaactgtccgagcaggtc
atgctggacgccctgatgttcgcgcatcgcggcatgcagccggtgatcgacgccatcatc
gagatggccgagcacgccgccaaggatccgttcgacttcaccgccgaggaccactccgac
gtcgtcacccggatccagtcgctggtcggcgaggacatcaaggccgcctatacccatgtc
ggcaaacatgcccgtcacgaagccgtcggcgccgccaagaagaaggcctcggccgccctg
gtgaagaccgacgagcacccggacggcgtcgattccgccacgttcggcacggccttcaag
gaatgcgaggcccacgtcctgcgtcgcgacatcatcgacaacgcccaccgcgtcgatggc
cgggcgctggacaaggtccgcgacatcgtctcggaagtcggcatcttcccgcgcacccac
ggttcggccctgttcacccgtggtgaaacgcaagccatcgtggtcgccaccctgggcacc
ggcgaggacgagcagtacgtcgactccctggccgggacgtacaaggagaagttcctcctg
cactacaacttccctccctattcggtcggcgagaccggtcgtatgggcggcgcgggccgt
cgggaaatcggtcacggcaagctggcctggcgggcgatccgtccgatgctgccgacctcg
gaagagttcccctatacgatccgcatcgtgtcggagatcaccgagtccaacggttcgtcc
tccatggcctcggtctgcggcgcctcgctggcgctgatggatgcgggcgtgcccctgaag
aagcccgtctcgggcatcgccatgggcctgatcctggagccgtcgggcgagttcgccatc
ctgtcggacatcctgggtgatgaagatcacctgggcgacatggacttcaaggtcgccggc
acgcgtgacggcatcacctcgctgcagatggacatcaaggtcgccggcatcaccgaggag
atcatgaagaaggccatcgcccaagcgtcggccggccgtcttcacatcctcgacgagatg
gacaaggccatcgacggcgcccgcaccgagctgggcgaatacgcgcccaagatcgaatcc
atcaaggttccggtcgacaagatccgcgacatcatcggcaccggcggcaagatcatccgc
gagatcgtcgaaaagaccggcgccaagatcaacatcgaggacgacggcacggtgaagatc
gccgcctcggaccaggaaaagatcgacgccgccaagaactggatctcgtcgatcgtgtcc
gagcccgagcccggcatgatctattccggcaaggtcgtgaaggtcgtcgacttcggcgcc
ttcgtgaacttcttcggggccaaggacggcctggtccatgtgtcccagatcgccctggaa
cgcgtcgccaacccggccgacgtcctgtcggaaggccaggaggtcaaggtcaaattcctg
ggcttcgacgatcgcggcaagaccaagctgtcgatgaaggtcgtcgatcagtcgacgggc
gaggacctgaccgacaagatcaatgccgagcgcgccgaacgcggcgagccccccctgacc
gaagacaccggcggcggcggcaagaagcgtgaaggcggcggagaccgtggcggcgatcgc
ggtcgcggccgcagccgtcgcgactga
DBGET
integrated database retrieval system
