Brevundimonas sp. AJA228-03: HZ989_03935
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Entry
HZ989_03935 CDS
T09566
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
brea
Brevundimonas sp. AJA228-03
Pathway
brea00521
Streptomycin biosynthesis
brea00523
Polyketide sugar unit biosynthesis
brea00525
Acarbose and validamycin biosynthesis
brea00541
Biosynthesis of various nucleotide sugars
brea01100
Metabolic pathways
brea01110
Biosynthesis of secondary metabolites
brea01250
Biosynthesis of nucleotide sugars
Module
brea_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
brea00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HZ989_03935 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HZ989_03935 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HZ989_03935 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HZ989_03935 (rfbB)
00525 Acarbose and validamycin biosynthesis
HZ989_03935 (rfbB)
Enzymes [BR:
brea01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HZ989_03935 (rfbB)
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Ortholog
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QTN20939
LinkDB
All DBs
Position
complement(785604..787004)
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AA seq
466 aa
AA seq
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MAAIELPAPGRVLGTQVHRCAIAYRFELANERLHRWIRDRRVDASPHGVRDFANHCNPAL
RFGTDLARGRDVRDRRRDVSIPLRHRAYCGRRSTHQTRLSEICTIRKKEAALAAYRILIA
GGAGFIGSALAREMILNSTAEVLVFDALTYATTSAALDPVRGSSRFRFIHGDIADPIAVR
AAIGMFNPDVVVNLAAETHVDRSIDGPAPFLQSNVVGVFVLLEEVLAHWRTLSGPDQAAF
RYHQVSTDEVFGSLGPTGAFSETTCYAPRSPYSATKAAADHFVRAWGHTYGLPVVVTNCS
NNYGPFQFPEKLIPLTIVRALAGDHLPVYGDGLHVRDWLHVDDHVRGLRAAFERGRGGQT
YVFGGETEKTNIALVNAICSALDTLMPRPDARSYAELIRLVDDRPGHDRRYAVDTAHTRQ
ALGWSPRVDIEHGLLDTVDWYLRHREWWTPLLSSRDAVARRGLAGG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgatagagctcccggctcccggacgcgtcctcggtacccaagtccatcgctgc
gccatagcgtatcgtttcgaactggccaatgagaggttgcacagatggattcgagaccga
agggttgacgcctcgccacacggcgtccgcgatttcgcaaatcattgcaatcccgcgctc
cgcttcggcaccgacctggcgcgcggtcgggacgtcagggaccgccgacgcgacgtctcc
attccccttcggcatcgcgcctattgtggacgccgatcgacgcaccagactagactgtcg
gagatctgtacgatccggaaaaaagaggcagctttggcggcgtatcgtatcctgatcgcg
gggggggcgggcttcatcggttcggcgctggcccgagagatgatcctgaactccactgcc
gaggtgctggtcttcgacgccttgacctacgcgacgacgtcggccgctctcgaccccgtg
cgcgggtcgagccgcttccgctttatccacggtgatatcgctgatccgattgcggtccgc
gctgccatcgggatgttcaaccccgatgtggttgtgaatctggccgcagaaacccatgtt
gatcggtcaatcgatggcccggccccctttcttcaaagcaacgtcgtgggggtttttgtt
ctgctggaagaggtgctggcccactggcgtacgctttcagggccggaccaggctgcattc
cggtaccatcaggtctcgacagacgaggtgtttggctcgctgggcccgacgggggccttt
agtgaaaccacctgctacgcgccgcgctcgccctattcggcgaccaaggccgcagctgac
catttcgtccgcgcctggggccacacctacggcctgccggtcgtggtgacgaactgctcg
aacaactacggccccttccagtttcctgagaaactcatcccgctgaccatcgtgcgagcg
ctggcgggcgatcacctgcctgtttacggcgatggcctgcatgtccgcgactggctccac
gtcgatgatcatgtccgggggttgcgggctgcgttcgaacgtggacgggggggccagacc
tatgtgtttggaggggaaacagagaaaaccaacatcgctttggtgaacgccatctgctct
gcgctcgacacgctcatgccgcggccggacgctcgctcttacgctgagttgatccgtctg
gttgacgatcgcccgggacacgacaggcgctatgccgtcgacacggcgcatacgcggcag
gctttgggttggtcgcccagggtggacatcgagcatggccttctggacacggttgactgg
tatctgcggcatcgcgagtggtggacccccctcctgagcagtcgcgacgccgtcgcaagg
cgcgggctcgcgggtggctga
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