Brevundimonas sp. AJA228-03: HZ989_11570
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Entry
HZ989_11570 CDS
T09566
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
brea
Brevundimonas sp. AJA228-03
Pathway
brea03030
DNA replication
brea03430
Mismatch repair
brea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HZ989_11570 (dnaE)
03430 Mismatch repair
HZ989_11570 (dnaE)
03440 Homologous recombination
HZ989_11570 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brea03032
]
HZ989_11570 (dnaE)
03400 DNA repair and recombination proteins [BR:
brea03400
]
HZ989_11570 (dnaE)
Enzymes [BR:
brea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HZ989_11570 (dnaE)
DNA replication proteins [BR:
brea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HZ989_11570 (dnaE)
DNA repair and recombination proteins [BR:
brea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HZ989_11570 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Endonuclease_NS
Motif
Other DBs
NCBI-ProteinID:
QTN18869
LinkDB
All DBs
Position
complement(2311528..2314989)
Genome browser
AA seq
1153 aa
AA seq
DB search
MAELGGNGFVHLRVRSAYSLLEGAIKAGKVGRLAADAGMPAVGVADRVNLFGALEFSEAA
KAVGVQPLIACALPVTGIGGKRAERWAKVPTVVLICQDETGWRNLCALSSSAYLDARDEE
PHVTWEQVVARSAGLILLSGGPDGPVDPLFVQNKPAEGARALAAMAGAFGDRFYVELQRH
GRPDEAAAERGLVDWAYGQDVPLVATNDVHYARQNQARSHDALLCIADGAFTGQEDRRRI
SPEHFFKTAAEMRTLFADLPEACDSTIEIARRCAFLVTTHPPILPRFDAGDGRTEPEELM
HQAREGLKARLKRVTPSAPEADYWTRLEWEVGIITQMGFPGYFLIVSDFIKWAKAHGIPV
GPGRGSGAGSLVAWALTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQERREEVITYV
QERYGKDRVAQIITFGTLQARAVLRDVGRVLQMPLGQVDRLAKMIPNNPANPTSLAQAIE
IEPRLREARDADPAVASLLETALELEGLYRNASTHAAGIVIGDRPLVELTPLYQDPRSDI
PATQFNMKWVEPAGLVKFDFLGLKTLTVLDRAHGYLARRGAAQDFNLLPLDDGKTYELMA
SGQTVGVFQLESQGMRDTLRKMRCGSIEEITALISLYRPGPMEMIDTYIDRKFGRAEVDY
LHPSLKETLSETYGVIIYQEQVMKIAQILAGYSLGEADLLRRAMGKKKKEEMDFQKARFI
KGASEKSVPEQQSDSIFELVAKFAGYGFNKSHAAAYALISYQTGWLKANHPVEFFAASMS
LDLSNTDKLAVFYQDARKFGVPVRAPDVNTSSADFDVAWDEGTGAVLYALGAIRNVGLEA
MKHVVEVRETGGRFVDIFDFLERVDPRAVNKRALEGLAKSGAFDSLHPNRRQLFEQADTL
MAYCQSVAADRTSSQVSLFGADQAGASRPRLKAVEPWVGPERLDQELSAVGFYLSGHPLE
DMEGALRRKRVTFVAEAVQRVEQGHDAFMMAGVVRRRQERASARNGEKFAFVTFSDPTGE
FECLFPPEQLRKCRDLLEVGSALMVRVRAKASDGEVRFFGDDCSRLETLVDDAAVGLRVH
VSARTTDPTAIEARLARAVAQPGAGGKGGEITLIASLDGRREVEMRLPGRYRLDGALRGA
LKSAPGVLMLEDS
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggctgagctcggcgggaacggtttcgtccatctgagggtccgctcggcctattcgctg
ctggagggcgcgatcaaggcgggcaaggtcgggaggctggcggcggacgcagggatgccg
gcggtcggcgtcgcggaccgggtcaatctgttcggggcgctggagttttccgaagccgcc
aaggcggtgggagtccagccgctgatcgcctgcgccctgccggtgaccggcatcggcggc
aagcgggccgaacgctgggccaaggtgccgaccgtggttctgatctgccaggacgagacg
gggtggcggaacctgtgcgccctgtcgtcctcggcctatctggacgcccgtgacgaggag
ccgcacgtgacctgggagcaggtcgtggcccggtcggcggggctgatcctgctgtcgggc
ggtccggacggtccggtcgatcccctgttcgtccagaacaagccggccgagggggcaagg
gcgctggcggcgatggccggggcgttcggcgaccgcttctacgtcgagctgcaacggcat
ggacggccggacgaggcggcggcggagcggggtctggtcgactgggcctatggccaggac
gtcccgctggtggcgaccaacgacgtccactacgcccggcagaaccaggcccggtcgcac
gacgccctgctgtgcatcgccgacggcgccttcaccggtcaggaggaccgcagacggatc
agtccggagcatttcttcaagacggcggcggagatgcggaccctgttcgccgacctgccc
gaagcctgtgacagcacgatcgagatcgcgcgccgctgcgcctttctggtcacgacccac
ccgccgatcctgccgcgcttcgacgccggcgacggccggaccgagcccgaagagctgatg
catcaggcgcgcgaggggctgaaggcgcggctgaagcgggtgacgccctcggcccccgag
gccgactactggacccggctggagtgggaggtcgggatcatcacccagatggggttcccc
ggctatttcctgatcgtgtcggacttcatcaaatgggccaaggcgcacgggattcccgtc
gggccggggcggggttccggggccgggtcgctggtcgcctgggccctgaccatcaccgat
ctggatcccttgcggttcggcctgctgttcgagcggttcctgaatcccgagcgggtctcc
atgcccgacttcgacatcgatttctgccaggagcggcgggaggaggtgatcacctatgtc
caggagcgctacggcaaggaccgcgtcgcccagatcatcaccttcggcacgctgcaggcg
cgggccgtgctgcgcgacgtcggccgggtgctgcagatgccgctgggacaggtggatcgc
ctggccaagatgatccccaacaatccggccaatcccacgagcctggcccaggcgatcgag
atcgagccgcgtctgcgcgaggcgcgcgatgccgacccggcggtggcgagcctgctggag
accgctctggagctggaggggctgtaccgcaatgcctcgacccatgcggcgggcatcgtc
atcggcgaccggcccctggtcgagctgacgcccctgtatcaggacccgcggtccgacatt
ccggccacccagttcaacatgaaatgggtcgagccggccgggctggtgaagttcgacttt
ctgggcctgaagaccctgacggtgctggaccgggcgcacggatacctggcccggcgcggg
gcggcgcaggacttcaacctgctgccgctggatgacggcaagacctatgagctgatggcc
tcgggccagacggtcggggtgttccagctggaatcgcaggggatgcgcgacaccctgcgc
aagatgcgctgcggctccatcgaggagatcacggcgctgatctcgctgtatcgccccggg
ccgatggagatgatcgacacctatatcgaccgcaaattcggtcgggccgaggtcgactat
ctgcatcccagcctgaaggagacgctgtcggagacctatggcgtcatcatctaccaggaa
caggtgatgaagatcgcccagatcctggcgggctacagcctgggcgaggccgaccttctg
cgccgcgccatgggcaagaagaagaaggaggagatggatttccagaaggcgcgcttcatc
aagggcgcgtccgagaagtccgtcccggaacagcagtccgactccatcttcgaactggtg
gccaagttcgccggctatggcttcaacaagtcgcacgcggcggcctatgcgctgatcagc
taccagaccggctggctgaaggcgaaccatccggtggagttcttcgccgcctcgatgagc
ctcgatctgtcgaacaccgacaagctggcggtcttctatcaggatgcgaggaagttcggc
gtgcccgtgagggcgcccgacgtgaatacatcctcggccgacttcgacgtggcgtgggac
gaggggaccggggcggtgctctatgcgctgggggccatccgcaatgtgggcctggaggcg
atgaagcatgtcgtcgaggtgcgcgagaccggcggtcgcttcgtcgacatcttcgacttc
ctggagcgggtcgatccgcgcgcggtcaacaagcgggcgctggagggactggccaaatcg
ggagcgttcgattccctccatccgaaccgccgccagctgttcgaacaggccgataccctg
atggcctattgccagagcgtggcggcggaccggacctcgtcgcaggtgtcgctgttcggg
gccgatcaggcgggggcgtcgcgtccccggctgaaggccgtggagccctgggtcgggccg
gaacggctggatcaggagctgtcggcggtcggcttctacctgtccggccacccgctggag
gacatggagggggcgctgcgacgcaagcgcgtgaccttcgtcgccgaggcggtgcagcgc
gtggagcagggtcacgacgccttcatgatggccggggtcgtgcgtcggcgtcaggagcgg
gccagcgccaggaatggcgagaaattcgccttcgtcaccttttcggacccgacgggcgag
ttcgaatgcctgttcccgcccgaacagctgcggaaatgccgcgacctgctggaggtcggt
tcggccctgatggtgcgggtgcgggccaaggcgtcggacggggaggtccgcttcttcggc
gacgactgttcgcggctggagacgctggtggacgatgccgcggtggggctgcgggtgcat
gtgtcggcccgcacgaccgatccgaccgccatcgaggcgcggctggcgcgggcggtggcc
cagcccggtgccgggggcaaggggggcgagatcaccctgatcgcctcgctggacggacgc
cgcgaggtcgagatgcggctgcccggccgctatcgtctggacggggcgctgcggggcgcg
ctgaagtcggcccccggcgtgttgatgctggaagactcctga
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