Brevibacterium sp. BDJS002: PGC08_06665
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Entry
PGC08_06665 CDS
T10203
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
breb Brevibacterium sp. BDJS002
Pathway
breb03420
Nucleotide excision repair
breb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
breb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PGC08_06665
03430 Mismatch repair
PGC08_06665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
breb03400
]
PGC08_06665
Enzymes [BR:
breb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PGC08_06665
DNA repair and recombination proteins [BR:
breb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PGC08_06665
MMR (mismatch excision repair)
Other MMR factors
PGC08_06665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
DEAD
ResIII
VPS51_Exo84_N
Motif
Other DBs
NCBI-ProteinID:
WCE41355
LinkDB
All DBs
Position
complement(1426451..1429003)
Genome browser
AA seq
850 aa
AA seq
DB search
MTAAAENIEEATPGADSRAAELLTGLNPRQREAVAHTGSPLLIVAGAGSGKTTVLTRRIA
YALATGRAHPGEVLAITFTNKAAKEMAERVRSIVGPASRAMWVSTFHSSCVRILRREAKV
LGMKSNFTIYDSQDAQRLVSQILKELGIDTKKYTPRSMLHRISNLKNDLQTPDDFIPRAN
NPADEVLADVFKRYTSRLRLANAFDFDDLISETVHLFGAFPEVADFYRRRFRHILVDEYQ
DTNPAQYALIKALAGDGAGGATGAELTVVGDSDQSIYAFRGATVRNIMEFEKDFPNAETI
LLEQNYRSTQNILDAANAVISNNQDRKDKKLWTSEGTGETIVGWVAENEQAEARFIVDRV
DELIDNEKYTYGDFAVFYRTNAQSRAIEDALVRSGIPYKVVGGTRFYERKEIKDALAYLR
VVANPDDDVNLRRILNVPKRSIGDRTEGIVADFADREGISFYTALGRLDEIVHLSARAKT
SVAKFYDLMRDLAATAEAAPLSRVIEAILEQSGYLESLQKSTDPQDESRVDNLAELVAVA
EDFVATRALADAADDEDADDADAESAETDSSAAVDEDSSADDGDARDSTDDAGADAADEG
LDAPSAGGSSIEAFLEQVALASDTDQIPDAELGQVTLMTLHTAKGLEFPVVFLTGLEDGG
FPHARSFENPNELSEERRLAYVGLTRARQRLIVTRAETRSMWGQPQYNPPSRFLSEIPES
LIEWENTGTFSSSMGGGFSSGGYGGGSLGGGYASSRSGGFGSSRGSSRSSGSRSGSANSS
SPVAGFPNRIRPNREVITVSVGEKVSHESFGLGTVTEVNGVGDKTVAVVDFGSLGTKRLL
LRYAPIEKLG
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcagctgaaaacatcgaagaagccacgccgggagccgactcacgtgcggcc
gaactcctcaccggactcaacccacgacagcgcgaggccgttgcccacaccgggtcacca
ctcctcatcgtggcgggtgccggttcggggaagacgacggttctgaccaggcgcatcgcc
tatgcgttggccaccggtcgggcacaccccggtgaggtcctggcgatcacgttcacgaac
aaggccgccaaggagatggccgagcgtgtgcgctccatcgtcggtcccgcttcgcgtgcc
atgtgggtctcgaccttccactcctcgtgcgtgaggatcctccgccgggaggcgaaggtg
ctgggcatgaagtccaacttcacgatctacgattcccaggacgcgcagcggctcgtgtcc
cagatcctcaaggaactgggcatcgacacgaagaagtacaccccgcggtcgatgctgcac
cgaatctccaatctcaagaacgatctgcagacacccgatgacttcataccccgggcgaac
aatcctgccgatgaggttcttgccgatgtgttcaagcgctacacctcccgtctgcgcctg
gccaatgccttcgacttcgatgacctcatttctgagaccgttcacctgttcggagccttc
cccgaggtggccgacttctaccgccgacggttccgacacatcctcgtcgacgagtaccag
gacacgaacccggcccaatatgccctgatcaaggcgctggccggcgatggggccggcggc
gccaccggtgctgagctgacggtcgtcggcgattcagaccagtcgatctatgccttccgc
ggggccacggtgcgcaacatcatggagttcgagaaggacttccccaatgcggagacgatt
ctgctggagcagaactatcgctccacgcagaacatcctcgatgccgcgaacgctgtgatt
tcgaacaatcaggatcgcaaggacaagaagctgtggacctcggagggcacgggcgaaacc
atcgtcggctgggtggccgagaacgaacaggccgaggcccgcttcatcgtcgaccgggtc
gacgagctcatcgacaatgagaagtacacctacggtgactttgccgtcttctatcgcacc
aacgcccagtcacgtgccatcgaagatgccctggtccgctcgggcatcccctataaggtc
gtcggcggcacacggttctacgagcgcaaagagatcaaggacgccctcgcgtatctgcgt
gtggtggccaacccggatgacgatgtgaatctgcggcgcattctcaatgtccccaaacgc
tccatcggcgatcgcaccgagggcatcgtcgcggacttcgccgatcgtgagggcatcagc
ttctacacggccctggggcgccttgatgagatcgtccacctctctgcccgcgcgaagacc
tccgtggcgaagttctacgatctcatgcgtgacttggcggccaccgcggaggcggctccg
ctctcgcgtgtcatcgaagcgatcctcgagcagagcggctacctcgagtcgctgcagaag
agcaccgacccgcaggacgagtcccgggtcgacaacctcgccgagctggtggccgtggcc
gaagacttcgtcgcgactcgggccctggccgatgccgcagacgacgaagacgccgatgat
gcggacgcagaatcagccgagaccgactcaagcgctgcggtcgacgaagactcttcagcc
gacgacggcgatgcgcgcgacagcaccgacgacgcaggcgcagacgctgcggatgagggc
ctcgatgctccttccgccggcggttcatcgatcgaggccttcctcgagcaggtggcactg
gcctccgacaccgaccagattcctgatgccgagctcggccaggtcacgctcatgaccctg
cacacggcgaagggactggagttcccggtcgtcttcctcaccggactcgaggacggcggc
ttcccccatgcccgatccttcgagaaccccaatgagctctccgaggagcggcgtctggcc
tatgtcggtctgacccgggccaggcagcgcctgattgtgactcgtgccgagacacgcagc
atgtggggccagccgcagtacaacccgcccagccggttcctgtccgagatccccgagagc
ctcatcgaatgggagaacaccggcaccttctcatccagcatgggcggcggcttctcctcc
ggcggctacggcggaggaagcctcggcggcggctacgccagctcacgcagcggcggattc
ggctcttcacgtggatcgagcaggtcctctggttcacgctcaggatccgcgaactcctcg
tcacctgtggccggtttcccgaatcggatccgacccaaccgagaggtcatcaccgtgtcg
gtgggagagaaggtctcacacgagtccttcgggctgggaacagtgacggaggtcaacggc
gtcggtgacaagacggtcgcggtcgtcgacttcggctccttgggcacgaagcgcctcctg
ctgcgctacgcccccatcgagaaactgggctga
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