Brevibacterium sp. BDJS002: PGC08_06980
Help
Entry
PGC08_06980 CDS
T10203
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
breb Brevibacterium sp. BDJS002
Pathway
breb00061
Fatty acid biosynthesis
breb00071
Fatty acid degradation
breb01100
Metabolic pathways
breb01212
Fatty acid metabolism
breb02024
Quorum sensing
breb04146
Peroxisome
Module
breb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
breb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PGC08_06980
00071 Fatty acid degradation
PGC08_06980
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PGC08_06980
09145 Cellular community - prokaryotes
02024 Quorum sensing
PGC08_06980
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
breb01004
]
PGC08_06980
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
breb04147
]
PGC08_06980
Enzymes [BR:
breb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PGC08_06980
Lipid biosynthesis proteins [BR:
breb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PGC08_06980
Exosome [BR:
breb04147
]
Exosomal proteins
Exosomal proteins of breast milk
PGC08_06980
Exosomal proteins of breast cancer cells
PGC08_06980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF6617
Motif
Other DBs
NCBI-ProteinID:
WCE41413
LinkDB
All DBs
Position
complement(1497264..1498994)
Genome browser
AA seq
576 aa
AA seq
DB search
MSTWFDTRPWLNTWGDLITEPRTLDTSTTLADLAATVAAHGEAEALNYYGFTLTWSDFDR
YTTAFAAYLAEKGIVSGDRVGIYDQNTPAFMIATYGIWKAGGTVVPLNPMYRGELEHIFA
DAEVKGLMVSKAAFLDRVAPYAENIPVVVLSDDRSFQTEGPDSIFAMFDALPGTPGQNPG
AGEVPDRPDFQAVVESHLDADFTPAAPAPEDEAIVVYTSGTSGNAKGASGTHASVSSNSR
YCLRTPTFEAGDGFLTLAPIFHITGFICQFIAGVAGGARLILNYRFEPTAFLDLILREQP
TYMAGPATVYTAMLAHPAVTPAHFAPFKRMMSGGAPLPEGLVNKFEEKAGIYIGQGYGLT
ETCAQAAIVPPGMRAPVDPDSGNLSCGLPQPDTMIRILDDLGEPLGPNEIGEVAISGPEV
VSEYINNTKATSEQIPDGELRTGDVGYMNDEGWLFIVDRKKDMINASGFKVWPREVEDVL
YTHPAIQEAAVVGIPDDYRGESVAAFVTLQPGPEADTVSEDEIVAFCREKLASYKAPRQV
TIIDELPKTSSGKVLRRTIRADAVAAAQEAKTSAAD
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgagcacttggttcgacacccgcccgtggctgaacacctggggcgacctgatcaccgag
ccccgcaccttggacacgtccacaacgcttgcggacttggcggcgacagttgccgcccac
ggcgaggcggaggcactcaactactacggattcacgctgacctggtcagacttcgaccgg
tacaccacagccttcgccgcgtacctggccgagaagggcatcgtctccggtgatcgggtc
ggcatctacgaccagaacaccccggcgttcatgatcgccacgtacggcatctggaaggcg
ggcggcaccgtcgttccgctcaatccgatgtatcgcggggagctcgaacacatcttcgcc
gacgccgaggtgaaggggctgatggtctcaaaggcggcgttcctggaccgggtggctccg
tacgccgagaacatcccggtcgttgtgctcagcgatgaccgcagcttccagaccgagggc
cccgattcgatcttcgcgatgttcgacgctctgcccggcaccccgggtcagaacccggga
gcgggtgaggttcccgaccgtcccgacttccaagctgtcgtcgaatctcacctcgatgcg
gacttcaccccggcggctcccgcgcctgaggacgaggcgatcgtcgtctacacctcgggc
acgtcgggcaacgcgaaaggtgcctctggcactcacgcctccgtgtcgagcaactcccga
tactgcctgcggaccccgaccttcgaggccggagacgggttcctcaccctggcaccgatc
ttccatatcaccggcttcatctgccagttcatcgcgggcgtcgccggcggtgcccgtctg
atcctcaactaccgcttcgaaccgacagcgttcctcgacctgatcctcagggagcagccg
acatacatggccggaccggccacggtctataccgcgatgcttgctcatccggccgtcacc
ccagcgcactttgcgccgttcaaacggatgatgtcgggcggcgcaccactgcccgaaggc
ctggttaataagttcgaagagaaggccggcatctacatcggacagggctacggactgacc
gagacctgcgcccaggctgcgatcgtgcccccggggatgagggctccggtcgaccccgac
agcggcaatctctcctgcggtctgccgcagccggacacgatgatccgcatcctcgacgac
ctcggtgagccgctgggacccaatgagatcggcgaagtcgctatctcgggtccggaggtc
gtctccgaatacatcaacaacaccaaggccacatcggagcagattcccgacggtgagctg
cgcaccggtgacgtcggctatatgaacgacgaaggatggctattcatcgtcgatcggaag
aaggacatgatcaacgcgtcgggcttcaaggtgtggccccgcgaggtcgaggatgtcctc
tacacgcacccggccatccaggaagccgccgtcgtcggcattcccgacgactaccggggc
gagagcgtcgctgcgttcgtcactctgcagccgggacctgaagcggacacggtcagcgaa
gacgagatcgtcgccttctgtcgggagaagctggcctcgtacaaggcaccacgtcaggtg
acgatcatcgacgagctgccgaagacgagctccggcaaggtcctgcgccgcacgatccgt
gccgatgccgtggctgcggcacaagaggcgaagaccagcgcagccgactga
DBGET
integrated database retrieval system
