Brevibacterium sp. BDJS002: PGC08_09315
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Entry
PGC08_09315 CDS
T10203
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
breb Brevibacterium sp. BDJS002
Pathway
breb03018
RNA degradation
Brite
Enzymes [BR:
breb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
PGC08_09315
Messenger RNA biogenesis [BR:
breb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PGC08_09315
Ribosome biogenesis [BR:
breb03009
]
Prokaryotic type
rRNA processing factors
PGC08_09315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WCE41841
LinkDB
All DBs
Position
1998122..2001229
Genome browser
AA seq
1035 aa
AA seq
DB search
MNDASNDGNEATEGILADLANLQQAVNTADSANGDVDESIREKLDHIAEAAESLRLPEPD
EDSDDSDDVVPEPKRSAPKKARDAVANRGLVFEQFVRDSNEDSQDSADSPEAASSVRGSE
ANDSSEADDASNDTAANAQSPAPAFDPRNPFAAPTAEPTPAPTPRSAPAVPHDGGLIFQV
PKAELAQPVQVEDTGDDSDDDYDDSDYSDSSDHDTSRVKNDDSEDNDSNDSGGRRRRRGG
RGRRSRGRDDNGSDSDAEGSAGASTEGSSDDDSASGTKNNESRSGSRSDKKGQQADSNKS
AETKSSDDESSKQPTEKSNDSSDDDHDDYDDNGSRRRRRRRSRTRSTDNDEVTSLKGSTR
LEAKRQRRKEGREAGRRRPVITEAEFLARRESVDRTMLVRESGEQTQLVVVEDGITVEHY
LKENRQQSSLIGNVYLGKVQNVLPSMEAAFIDIGKGRNAVLYAGEVNWDALGMDGKARRI
EVALSPGDAVLVQVTKDPIGHKGARLTSQISLPGRFLVYVPGNSMTGISRKLPDVERNRL
KKLLKELVGDSNGVIVRTAAEGASDKELSTDVERLAKRWETIEKKSKSTKVLAPQLLYSE
PDMIVRIIRDVFNEDFSSLVIDGDGAWNTIHEYVEAVAPDLLDRVHRYSEDEDIFDHYRV
EEQVQKALQRTVNLPSGGSLVIDRTEAMTVIDVNTGKFTGSGGNLEETVTRNNLEAAEEV
IRQVRLRDIGGIIVVDFIDMVLESNRDLVVRRLVECLGRDRTKHQVAEVTSLGLVQMTRK
RIGTGLAESLVSAGADLSGRGLLLPGSEEDGSKAHHGNRSSNNDGGNSRRDRKRRGDNKS
SSKSNDSDGQSDAVANDASRSAVAAIAKATLKKDEAESKEPGSSQDASVSDNASSSANTD
SSKDSQGNEPSDSAGNGGSGRSRTRSNRRRSQAKSADSSDSAQDQSAQDTTVDETPAPEQ
PAQEQPAQAKPARAKKPEVPAAELPLMIGADSATKVAKAEPVKAAPRRKPAAKSEAKSET
AQPSLPTSFVIIGED
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgcgtcaaacgacggcaacgaagcaacagagggcatcctcgcggatctcgcc
aacctgcagcaggcggtgaatacggcagactccgcgaacggagatgtcgacgagagcatc
agggagaagctcgatcacatcgcggaggccgcagaatccctgcgtcttccagagcccgat
gaggactcggatgacagcgacgatgtcgtccccgagccgaaacgcagtgcaccgaagaag
gcacgtgacgccgtggcgaacagaggactggtcttcgagcagttcgtccgcgattccaac
gaagactcacaggactctgcagactcaccggaggccgcgagttctgtccgggggagtgaa
gcgaacgattcctcggaggccgacgacgcttcgaatgacaccgctgcaaacgcccaatcg
cctgcgccggcgttcgatcctcgcaatcccttcgccgcgccgacagccgagcctacgccc
gcgccgacaccgcgaagcgctcctgcagtgcctcacgatggcggcctgatcttccaggtg
cccaaggccgaactggctcagcccgttcaggtggaggacaccggcgacgattccgacgac
gactatgacgactcggactattccgactcttcagaccacgacaccagccgtgtgaagaat
gacgactccgaggacaatgactcgaatgattccggcggccgtcgccggcgtcgcggtggc
cgtggccgccgctcccgaggacgcgatgacaacggcagcgattccgacgccgagggctct
gccggagcctcaaccgagggttcctccgacgacgactccgcctcgggaacgaagaacaat
gagtcccggtccggcagccgttcggacaagaagggccagcaggcagactcgaacaagtcc
gcggagacgaagagctccgatgacgagtcctccaagcagcccacggagaagtccaacgac
tcctccgatgacgatcacgatgattacgacgacaacggttcgcgtcgccgtcgccgtcgt
cgctcacgtacacgcagcaccgacaacgatgaagtgacttcgctgaagggctccacgcgc
ctggaggccaaacggcagcgccgcaaggaaggccgcgaggccggtcgccgtcgccccgtc
atcaccgaggctgaattcctcgcccgtcgtgaatcggtcgaccggacgatgctggtgcgc
gaaagcggcgagcagacccagttggtcgtcgtcgaggacgggatcaccgttgagcactac
ctcaaggagaaccgccagcagtcctccctcatcggcaatgtctacctgggcaaggtccag
aacgtcctgccgagcatggaagcagcgttcatcgacatcggcaagggccgcaacgccgtt
ctctacgccggtgaggtcaactgggatgccctgggcatggacggcaaagcccgtcgcatc
gaagtcgccctcagccccggcgacgcggttctcgtccaggtcaccaaggacccgatcggt
cacaagggtgcccgcctgaccagccagatctctctgcccggacgtttcctcgtctacgtt
cccgggaactcgatgaccggcatctcgcggaagctgcccgatgtcgagcgcaatcgcctc
aagaagctgctcaaggaactcgtcggtgactcgaacggagtcatcgtgcgcaccgcggcc
gaaggcgccagcgacaaggagctcagcacagacgtcgaacgactggccaaacggtgggag
accatcgagaagaagtcgaagtcgacgaaggtgctcgccccccagctcctctacagcgag
ccggacatgatcgtgcgcatcattcgcgatgtcttcaacgaggacttctcctcgctcgtc
atcgacggtgacggagcctggaacaccatccacgaatacgtcgaggccgtcgcgccggac
ctgcttgatcgtgtccaccgctacagcgaagacgaagacatcttcgaccactaccgggtc
gaggaacaggttcagaaggcgctccagcgcacggtcaacctgccctccggtggttccctt
gtcatcgaccgcacagaggcgatgacggtcatcgacgtcaacaccggcaaattcaccggt
tcgggcggaaacctcgaagagaccgtgacccgtaacaacctcgaagcggccgaagaggtc
atccgtcaggttcgcctgcgtgacatcggcggcatcatcgtcgtcgacttcatcgacatg
gttctcgagtcgaatcgggacctcgtcgtgcgtcgtctcgttgaatgcctgggccgggac
aggaccaagcatcaggtcgccgaggtgacctcgctgggtctcgtgcagatgacccgtaaa
cgcatcggcacggggctcgccgagtccctggtcagtgctggtgctgacctctcaggccgg
gggctgctgctgcctggctcggaagaggacggatcgaaggcccaccatggcaaccggtcc
tcaaacaatgacggtggcaacagcaggcgtgatcgtaagcggcgcggcgacaacaaatca
tcatcgaagtccaacgactccgacggccagtcggatgccgttgccaacgatgcctcccgc
tcagccgttgccgccatcgccaaggccacactgaagaaggacgaagccgagtcgaaggag
cccggaagctcccaagacgcgtcggtgtctgataacgcttcttcctcggcgaacaccgac
agctctaaggactcgcagggcaacgagcccagcgattcggccggaaacggcggatcgggc
cgttcccggacccgcagcaacaggagacgctcgcaggcgaagtccgctgattcgtccgac
tccgcacaggaccagtcggctcaggacacaacggtcgacgagacgcctgcgccggagcag
cctgcccaggagcagccggcacaggccaagcctgcgcgggcgaagaaacctgaggttccc
gcagccgagctgccgctgatgatcggagccgactcggcgaccaaggtggccaaggctgaa
ccggtcaaggccgctcctcgacgcaagcctgccgctaagtccgaggccaagagcgagacg
gcgcagccgtcgttgccgacctcgttcgtcatcatcggcgaggactga
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