Brevibacterium sp. BDJS002: PGC08_09505
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Entry
PGC08_09505 CDS
T10203
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
breb Brevibacterium sp. BDJS002
Pathway
breb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
breb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PGC08_09505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
breb03000
]
PGC08_09505
03400 DNA repair and recombination proteins [BR:
breb03400
]
PGC08_09505
Enzymes [BR:
breb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PGC08_09505
Transcription factors [BR:
breb03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PGC08_09505
DNA repair and recombination proteins [BR:
breb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PGC08_09505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
DUF6233
Motif
Other DBs
NCBI-ProteinID:
WCE41873
LinkDB
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Position
2035038..2036528
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AA seq
496 aa
AA seq
DB search
MLTTDQCYQAVAGRDRRFDGMFFTAVRSTGIFCRPSCPARTPLRKNVDFYQTAAAASDAG
FRACKRCRPDASPNSPEWDTRADITARAMRLIQDGLVDRAGISGLASALGYSSRQLGRVL
QSELGVGPLAIARTERVRTARTLVESTPLSMSEIAFAAGFSSIRQFNDTFRAVYSSSPRD
LRDGRSEPRRGQDIVVRLAYRPPLDHVHLFRYLGLRAIAGVEDVSDDHYTRSLRLAHGAA
VVTLVPGSGDFIECRLRLADTRDLGSAVARARRILDLDADPTAVAATMAAAGLSELVDRY
PGIRSPGTGDPVELAIRTVLGQQISVTAAQTHLNRLVTAYGQPLPEDLRVGTVDRVFPTA
AAIAEVPDEHWSLPGRRIETLRALSAGLADGSINLGPGCDREEVNDSLLALPGIGPWSLG
YIRMRALGDPDVLLGSDLGVKKALESLTSSEPTSTSWLHRVDRCRPWRSYVTHLLWAHHS
QTQSRTQIHDQNRRRQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccacagatcagtgctatcaggcagtagccgggcgcgacaggcgcttcgacgga
atgttcttcactgccgtgcgctcaaccggcatcttctgccgcccgtcgtgcccggcgaga
acgccgctgcgtaagaacgtcgatttctatcagacggcagctgcggcctcggatgccgga
ttccgggcctgcaaacggtgccgcccggacgccagcccgaattctcccgagtgggacacc
cgagctgacatcacggctcgggccatgcgactcatccaagacggactcgtcgatcgggca
ggaatctccgggctcgcctcggcgctgggatacagttcacgccagctgggtcgagtgctc
cagtccgaactgggggtcggccccctcgccatcgcccggaccgaacgagtccggactgcc
cgcaccctggtcgaatccacgccgctgtccatgagcgagatcgcattcgccgccggattc
tcaagcatccgtcaattcaacgacaccttccgtgccgtctattcgtcgagtcccagagat
ctgcgcgacggtcgcagcgaacctcgcagggggcaggacatcgtcgttcgtctcgcctac
cgtccaccgctggaccacgttcacctgttcagatatctgggattgcgtgcgatcgccggc
gtggaagacgtcagcgatgatcactacacccgctcgctgcgtctcgcccacggggcagcc
gtcgtcactctggtcccggggtccggagacttcatcgaatgccgcctccgcctggccgat
acccgcgatctcggcagcgcagtggcccgggcacgacgaatcctcgacctcgatgcggac
ccgaccgcggtggcagcgacgatggcagccgccggcctctcagaactcgtcgacaggtac
ccagggattcggtccccgggaaccggtgacccggtcgaactcgcaatccgcacggtcctg
ggacagcagatctcggtcaccgccgcacagacacacctcaaccgcctggtcaccgcctac
ggtcagccgctgccggaggacctgagagtcggcactgtcgaccgagtcttcccgacggca
gcagccatcgcggaggttccggacgagcactggtcactgccgggccgcaggatcgagact
ctccgcgcgctgagcgcagggctggcagacggttcgatcaacctgggtcctggctgcgat
cgggaagaagtcaacgacagcctcctggcactgcccggcatcggaccctggagcctcggc
tacatccgaatgcgcgcactgggagaccccgatgtccttctcggctcagaccttggagtc
aaaaaggcgctggagtcgctcaccagttcagaaccgacgtcgacctcctggctccacagg
gttgaccgatgtcgaccatggcggtcctacgtcacgcatctgctgtgggcccatcattcg
caaacacaatcacgaacacagatacacgatcagaatcggagaaggcaatga
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