Brevibacterium sp. BDJS002: PGC08_10395
Help
Entry
PGC08_10395 CDS
T10203
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
breb Brevibacterium sp. BDJS002
Brite
KEGG Orthology (KO) [BR:
breb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
breb03019
]
PGC08_10395
Enzymes [BR:
breb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PGC08_10395
Messenger RNA biogenesis [BR:
breb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PGC08_10395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
SH3_HelY
ResIII
Helicase_C
MTR4-like_stalk
DEXQc_Suv3
AAA_30
AAA_22
nSTAND_NTPase5
IstB_IS21
ATPase_2
nSTAND3
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WCE38443
LinkDB
All DBs
Position
complement(2215257..2217980)
Genome browser
AA seq
907 aa
AA seq
DB search
MTESESPIQSSAETETLSPSAAYADYKDRTKKAQTPLGRFSARMEFELDDFQLEACAQLQ
DGKDVLVTAPTGAGKTLIAEFAVELARDEGKRVFYTTPIKALSNQKFNDLMDVHGVENVG
LLTGDTSIRRDAPIIVMTTEVLRNMLYNNVAGLSDLGFVVLDEVHYLADRFRGPVWEEVI
IHLPDRVQMVSLSATVSNVEEFGAWLSEVRGPTTVVSTSHRPVPLVNHVLVGHRMYDLFT
HHDSDRIDPALNHATRTHGGPRSKRERATRARFRRPSRTQVVSSLAEAGMLPAIMFIFSR
NACDEAVEQYLSSGFDLNSREEKVIVNAALEKLRDELASEDLGILGFHSFREGLLLGVAA
HHAGMIPQFKQLVEELFSQGIIKVVFATETLALGINMPARTVVLEKLVKFNGEAHVSITP
GEYTQLTGRAGRRGIDQIGHAVVIWHPSFEVNEIAGLASNRSYALNSAFGPTYNMTANLL
SRMSSAEAAKVLETSFAQFQADKAVVGLAKKVRKNEATIAAYEKSMKCDLGDFAEYARLR
QAISDTEKQETRTKSKNRQREIVESLTALKIGDVVTLPTKRVEGAAVIIAPMSSRDGGSR
LPTVLTEQGKVWHLRPHEVTAPLPAQGRVRVPKKFNHRQAGDRRQLLGILNDAIHEGKVD
HEAHWESKPGSPGVSSSVTEMTAQLRAHPCHDCPDREMHARWANRAAKLVKENDSLIARI
EGRTTSIALVFERVQDVLRTLGFDPEQSDMLRRIYGERDLLVALTIRAGLWDNLVEPELA
AFASCFVFQSRRADTLHSERAPSRDLKVNGDEAVTMWRKLFQLEEQHALSTTQEPDRGLF
KPMYRWTEGKNLADSLRGTDIAAGDFVRWAKQSLDLLGQVAEVAEPETAVRIRRTIEAIR
RGVVADS
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatccgagagcccgatccaatcctcagccgagaccgagacgttgagcccctcg
gcggcctatgccgactacaaggaccggacgaagaaggcccagactcctttagggcggttc
tcggccagaatggaattcgagctcgacgacttccagcttgaggcctgcgcccaactgcag
gacggcaaagacgtcctcgtgaccgcccccaccggagcgggtaagactctgatcgcggaa
ttcgctgtggagctggccagagacgaaggcaaacgggtcttctacacgaccccgatcaag
gcgctgagcaatcagaagttcaatgacctgatggacgtccacggcgtggagaacgtcggt
ctgctcaccggcgacacctcgatccggcgtgacgcgccgatcatcgtcatgaccaccgag
gtcctgcgcaacatgctctacaacaatgtcgctgggctctctgatctcggtttcgtcgtc
ctcgacgaggttcactacctggccgaccgtttccgtggtcccgtgtgggaagaagtgatc
atccatctgccggaccgggtgcagatggtgtcgctgtcggcaacggtgtccaacgtcgag
gaattcggtgcctggctgagcgaggtacgcggacccaccaccgtcgtctccacctcccac
cggcccgtgccgctggtcaaccatgtcctcgtcggccaccgcatgtacgatctgttcacc
caccacgactccgaccgaatcgatcctgcgctcaatcatgcgactcggacccacggcggg
ccccgttccaagcgtgaacgagccactagggcccgtttccgcaggcccagccgcacccag
gtcgtgtcctctctggcagaggccggaatgctgccggcgatcatgttcatcttctcgcgc
aatgcctgtgacgaagcggtcgaacagtatctgagctcgggcttcgacctgaactcacgt
gaagagaaggtcatcgtcaacgccgcactcgaaaagctgcgcgatgaactggccagcgag
gatctgggcatcctcgggttccattcgttccgcgaaggtcttctcctgggagtcgccgcc
caccatgcgggaatgatcccgcagttcaaacagctcgtcgaggagctgttctcccaagga
atcatcaaggtcgtcttcgccacggagaccctggcattgggcatcaacatgcctgcccgc
accgtggttcttgagaagctggtgaagttcaacggagaggcccacgtctcgatcacgccg
ggggagtacacccagctgaccggacgcgcagggcgccgcggcatcgaccagatcggccat
gccgtagtcatctggcatcccagcttcgaagtcaacgagatcgctgggctggcatccaac
cgctcctatgcactcaattctgcgttcggacccacctacaacatgacagccaacctgctg
tcccggatgagctccgccgaggctgcgaaggtcctggagacctcgttcgcacagttccag
gcggacaaggccgtcgtggggttggcgaagaaggtgcgcaagaacgaggccacgatcgcg
gcctatgagaagtcgatgaagtgcgatctgggcgatttcgctgagtacgcgcgattgcgg
caggccatcagcgataccgagaagcaggagactcgcacgaagtcgaagaatcggcagcgt
gagatcgtcgagtccctgaccgctctcaagatcggcgatgtcgtcaccctgccgacgaag
cgagtcgaaggcgcagcggtcatcatcgcacccatgagctcccgggatgggggttccaga
ctgccgacagtgttgaccgaacagggcaaagtctggcacctgcggccccacgaggtgacc
gcgccgctgccagcccagggtcgagttcgagtgccgaagaagttcaaccaccgccaggca
ggggaccgccggcagctgctgggcatcctcaacgacgccatccacgagggtaaggtcgat
cacgaggcacattgggagtccaaaccaggttccccgggtgtgagctcgagcgtgacggag
atgaccgcgcagctgcgtgcccatccctgtcatgactgccccgaccgtgagatgcacgcc
aggtgggccaaccgagcggccaaactggtcaaggagaacgattcgctcatcgctcgcatc
gaaggcaggacgacctcgatcgccctcgtcttcgaacgtgttcaggatgtgctgcgcacc
ctcggcttcgatcccgagcagtccgatatgctgcgccgcatctacggggaacgagacctg
ctcgtggcactgaccatccgagccgggctgtgggacaacctcgtcgaacctgaactcgca
gcattcgcatcgtgcttcgtcttccagtcacggcgcgccgacacactccattcggagcgc
gcacccagccgcgatctcaaggtcaacggcgacgaagcggtgacgatgtggcgcaagctc
ttccaattggaggagcagcacgcgctgtcgacgactcaggaacccgaccggggcctgttc
aaaccgatgtaccgctggaccgaaggcaagaacctcgccgattccctgcgcggcaccgac
atcgccgctggcgacttcgtccggtgggccaaacagagccttgacctcctcggtcaggtc
gccgaggtggccgaaccggagaccgctgtgcgcatccggcggaccatcgaagccatccgt
cgcggagtcgtcgcagactcctga
DBGET
integrated database retrieval system
