Brevibacterium sp. BDJS002: PGC08_11865
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Entry
PGC08_11865 CDS
T10203
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
breb Brevibacterium sp. BDJS002
Pathway
breb03030
DNA replication
breb03430
Mismatch repair
breb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
breb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PGC08_11865 (dnaE)
03430 Mismatch repair
PGC08_11865 (dnaE)
03440 Homologous recombination
PGC08_11865 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
breb03032
]
PGC08_11865 (dnaE)
03400 DNA repair and recombination proteins [BR:
breb03400
]
PGC08_11865 (dnaE)
Enzymes [BR:
breb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PGC08_11865 (dnaE)
DNA replication proteins [BR:
breb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PGC08_11865 (dnaE)
DNA repair and recombination proteins [BR:
breb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PGC08_11865 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
OB_MCM10
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
WCE42022
LinkDB
All DBs
Position
complement(2533496..2537059)
Genome browser
AA seq
1187 aa
AA seq
DB search
MSVPKDDFVHLHVHTEYSMLDGAARLTDLMAATKASGMSAIATTDHGYLFGAFDFWSQAT
AAGIKPIIGVEAYVTPGTDRRDKTRVKWRTDESQKRDDLSGGGAYTHMTLLSRNNTGMRN
LFKASSYASLDSVFSKWPRIDQDLLETYSEGLIATTGCPSGEIQVRLRLGQYEEARAAAG
KYREMFGKDNYYVELMDHGLSIEKRVTKDLIRLSKEMDIPLVATNDLHYTHESDAKAHEA
LLAIQSGSKLIEPTYDQGGSRFAFSGSGYYLKSGAEMRALFSEFPEACDNTLEIAEKCEV
SFDTSANYMPKFPCPPGEDETSWLVKEVQTGLEYRYPGGIPDDVRKQADYELDVIISMGF
PGYFLVVADFINWSKDNGIRVGPGRGSGAGSMVAYAMRITDLDPLKHGLFFERFLNPDRV
SMPDFDVDFDDRRRGEVIDYVTRKYGDERVAMIVTYGTIKTKMALKDSARVLGKPFSMGE
RLTKALPPAEMAKDIPLADIENAESKRYNEAGEFREFVDSDPDARETFETAKGIEGLKRQ
WGVHAAGVIMSSDPIIDVIPIMRRFQDGQVITQFDYPTSEGLGLIKMDFLGLRNLTIISD
AVENIKANRDYDLDLEHLDLDDRGAYDLLSRGDTLGVFQLDGGGLRALLRLMKPDNFEDI
SATIALYRPGPMGADSHTNFALRKNGLQEVTPIHPELEEPLEDILGTTYGLIIYQEQVMA
IAQKVAGYSLGQADILRRAMGKKKKSELDKQQVGFFGGMKERGYSEAAAQALWDILLPFS
DYAFNKAHSAAYGLVSYWTAFLKAHYTAEYMAALLTSVGDNKDKLAIYLNECRRLGITVL
PPDVNDSALHFTPVGEDIRFGMGAVRNVGANVVDGIVEARGEKGAYTSFTDFLDKVPSHV
CNKRTIESLIKAGGFDSLGQTRRSLVEVHEEAVDSVIGVKRQEANGQFDLFAGLGGDDDE
PSFSVAIPDRPEWEKKEKLAFERDMIGLYVSDHPLNGLEGVLAAESEASIAEVVDPESHR
HDGSQVKICGMITQVSRKVSKNSGKPYAIVTVEDLNAEVEVMFFGDTYEPVASLLTNDLV
ISLTGRIRHSDDRPTSMMAMSMTIPDVTDPKDRPLNLMLPMEKATEEMASKLLQVLESHK
GQTDVHLVLSQPGRQTVMRLDRAIRVDPNPSLYGDLKALLGSRCLTA
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
ctgtcagtgccgaaagacgatttcgtccatcttcacgtccacaccgaatactccatgttg
gacggagccgcccgactcacggacctgatggccgcgaccaaggcatcgggaatgtcggcc
atcgcgaccacggaccacggctatctcttcggtgccttcgacttctggtcgcaggcgacc
gcagccggcatcaaacccatcatcggcgtcgaggcctatgtcactcccggcaccgaccgg
cgcgataagaccagggtgaaatggcgcacggatgagtcgcagaaacgtgacgatctctcc
ggcggtggtgcctacacccacatgaccctgctctcacgcaacaacacgggcatgcgcaat
ctcttcaaggcctcgtcctacgcttccctcgactctgtcttcagcaagtggccgcgcatc
gaccaggacctgctcgagacctactcggaggggctcatcgcgaccacgggctgtccctcg
ggggagatccaggtccgcctgcgcctcgggcagtacgaagaggccagggccgctgccggc
aaataccgtgagatgttcggcaaggacaactactatgtcgagctcatggaccatgggctc
tcgatcgaaaagcgtgtgaccaaggacctcatccgtctgtcgaaggagatggacattccc
ttggtcgcgaccaacgacctgcactacacgcatgagtccgatgcgaaggcccacgaagcg
ctgctggccatccaatccgggtcgaagctcatcgagcccacctatgaccagggcggctcc
cgcttcgccttctccggatccggctactacctcaaatcgggtgcggagatgcgcgccctg
ttctccgaattccccgaggcctgcgacaacaccctcgagatcgccgagaagtgcgaagtc
tccttcgacacctcggcgaactacatgccgaagttcccctgccctcccggcgaagacgaa
acgtcctggctggtcaaagaggtgcagacgggactcgaataccggtacccgggaggaatc
cccgacgatgtgcgcaagcaggccgactacgagctcgacgtcatcatctcgatgggcttc
cccggttacttcctcgtcgtcgccgacttcatcaactggtcgaaggacaacggcatccgc
gtcggacccggacgtggttcgggtgccggctctatggtcgcctacgcgatgcgcatcacc
gacctcgacccgctcaagcacggactgttcttcgagcgcttcctcaaccctgaccgtgtc
tccatgcccgacttcgacgtcgacttcgatgatcgtcgccgcggcgaggtcatcgactat
gtgacacggaagtacggtgacgaacgtgtcgccatgatcgtcacctacggcacgatcaag
acgaagatggcgctcaaggactccgcgcgcgtcctcggcaagccgttctcgatgggggag
cgtctgaccaaggctctgcccccggccgagatggccaaggacattccgctggccgacatc
gagaacgccgaatcgaagcgctacaacgaggcgggggagttcagagaattcgtcgactcc
gacccggatgcgcgtgagaccttcgagacggcgaagggcatcgagggactgaagcggcag
tggggcgtccacgctgccggagtgatcatgtcctcggacccgatcatcgatgtcattccg
atcatgcgtcgtttccaggacggccaggtcatcacccagttcgactaccccacctctgag
ggcctcggactgatcaagatggacttcctggggctgagaaacctcacgatcatctccgac
gcggttgagaacatcaaagcgaaccgcgattacgatctcgatctcgaacacctcgacctc
gacgaccgcggggcctacgatctgctctcccgtggtgacacactcggcgtgttccagctc
gacggcggtggactgcgcgccctgctgcgactgatgaagccggacaacttcgaagacatc
tccgcaacgattgcgctctaccgtccgggccccatgggtgccgactcccacacgaacttc
gcgctgcgcaagaacggtctgcaggaggtcaccccgatccatccggagctcgaggagcct
ctcgaggatatcctcggcacgacctacggtctcatcatctaccaggagcaggtgatggcg
attgcgcagaaggtcgccgggtactcgctgggccaggcggatattctgcgtcgcgccatg
ggcaagaagaagaagtccgagctggacaaacagcaggtcggcttcttcggcggcatgaag
gaacgcggctactccgaggcggcggcgcaggccctgtgggacattctgctgcccttctcc
gactatgcgttcaacaaggcccactcggcggcctacggtctcgtgtcctattggacggcc
ttcctcaaggctcactacacggcagagtacatggccgcgctgctcacctcggtgggcgac
aacaaggacaaactcgcgatctacctcaatgagtgtcgacgcctgggcatcacggtgctg
ccgccagacgtcaacgactcggccctgcacttcaccccagtcggtgaggacatccgcttc
ggtatgggagccgtgcgcaacgtcggcgccaacgtcgtcgacggcatcgtcgaagcccgt
ggggagaagggggcatacacctccttcacggacttcctcgacaaggtgcccagccacgtc
tgcaacaagcgcacgatcgaatcgctcatcaaggccggcggcttcgattcgctgggccag
actcgcagatcactcgtcgaggtccatgaggaggccgtcgactcggtcatcggcgtcaaa
cgtcaggaggccaacggccagttcgatctgttcgccggactcggcggggacgatgacgag
ccgagcttctccgtggcgattcccgaccgaccggaatgggagaagaaggagaagctcgcg
ttcgaacgcgacatgatcggcctctacgtctccgaccacccgctcaatggtctcgaagga
gtcctggcagctgagtcggaggcctccatcgccgaggtggtggatccggagtcccaccgc
cacgatggatcgcaggtcaagatctgcggcatgatcacacaagtcagccgcaaggtgtcg
aagaactcaggcaagccgtacgcgatcgtgaccgtggaggacctgaacgccgaggtggag
gtcatgttcttcggtgacacctacgaacctgtggcgagcctgctgaccaacgacctcgtc
atctcgctgaccggacgcatccgccattccgatgaccgcccgacgtcgatgatggcgatg
tcgatgacgattcccgatgtcaccgacccgaaggatcgtccgctcaacctcatgctgccg
atggagaaggccacagaggagatggcctcgaagctgctccaggtcctcgaatcccacaag
ggccagaccgatgtgcacctggtgctctcgcagccgggccggcagacggtgatgcgtctg
gatcgcgccatccgcgtcgatcccaatccgagcctctacggtgacctcaaggcactgctg
ggatcccgctgtctgacagcctga
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